Triplophysa rosa: 130569812
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Entry
130569812 CDS
T09216
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
tros
Triplophysa rosa
Pathway
tros03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130569812 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130569812 (nfrkb)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
130569812 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
130569812
NCBI-ProteinID:
XP_057215690
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Position
LG19:11527068..11539876
Genome browser
AA seq
1299 aa
AA seq
DB search
MDALDHMLTDPLESGMDRDGRVMEECMLGNCRVRVPEDLLEDPEIFFSVMSESTWTDVLT
DAQRTHLRQLLPQFSENNISEQDNIIGDLFNDQNFLFGNPLHIAQKLFRDGYFNPEVVKY
RQLCAKSQKKRQIFSLQQYYHKLLKQILVSRKELLDLAVRSGPELAVKRRYPAPSHKEVL
EQRVRCRVGHILKDVKTECVDSNVSSDEDDTASWLPVPQSPSSPTPTVSLRVLPSLSTQD
MKTRDKPELGEKDLTAMLHRHREKRKRQPDHPDLITSDLHLGDVMSRVNIGRKGSITNVF
DLVLPKKKIKEEKRKKKMRPIKIESEEVCDVLMSAVSVNPALADTPAALAQSIKEEPMDE
SQNSPELVEEIAISFFHLLKDVLRLEGLATSSMVEEKVQQWQSSPASTLNPWYSMAPCWS
ESVVPALQFLAGESKSGVMALPTGFIPLVEFKELTQQWKWIGLNPDGDKDLSALCQLWLE
SKDHVVVVKQEGEETAELTPPTPRVWTDYVVRPSTGEERHVFQEQEQQRYDQPHKAFTYR
MHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAE
ICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEF
ERIHQAQAAAAKAKKALQQKPKPAPKPKAGGKEPGSKNGAVEAAQGSGTEGVAVNPASLP
QPPSTPTPSTPGTPKSLLPHAAATPTKVSAPDPTKTSPSVLLVSPPPMPQLGSLLSASKP
QVSQHAPAQPATRVVAHSAAAGSLPQVRVVTAQPGISTSSAAQPATLVHQSPHHIRVPVS
VAHGKSITQAVVTVPLRGQSTGSPIQVQASRAQASLTVPGLASAVMVTKPQTSSPVSPAH
NPASPAVLQGVSSQNIIKQVAITGQLGLKTQSGTGIPLTATNLRIQGKDVLRLPPSSITT
DAKGQTVLRITPDMMATLTKSPMATVKLTPDMLSTATGAGSKSISATLHVSPSQVSLPAH
KAAPSATAETLAAKSCASLGTTGTATLVKVHQELKATCDTAIRLMPALAVTMPDPKTRTF
STVTSSDSKAGTTIRIVPNLGVIPQKQGQTVSISTTTTGAKPITVSSGAATVTIATSGVG
GAKGVTLSSAATGSPLSLGAAAAVRQVPVTATVVTTQAGKLPTRITVPLSVLSQPLKNKS
MVSTPILKGNISTNISNLGRNIILTTMPAGTKIIAGNKPVSFVTAQQLQQLQQQGQATQV
RIQTVPAQQLQRTASSPKSTVSTVVFSTAPSPKTNPDPQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggatgcactagatcacatgttaacagacccactggagtctggaatggaccgtgatgga
cgtgtgatggaggagtgcatgttgggaaactgcagagttcgggttcctgaggacctacta
gaggatccagagatttttttctctgtgatgagcgagagcacatggacagatgttctgaca
gatgctcaacggacacatcttcgtcagctcctaccacagttctctgagaacaacatctct
gagcaggacaacatcattggcgaccttttcaacgaccagaatttcttatttggcaatccc
ttgcacattgcccagaaactttttagagatggttacttcaatccagaagtggtgaagtac
aggcaactttgtgccaagtctcagaagaaaagacaaatattctcccttcagcagtactac
cataaattactcaagcagatcctggtctccagaaaggagttgctggatttggcagttcgc
agtggacccgagctggccgtaaaacggcgttatcctgccccctctcacaaggaggtgcta
gaacagagagtcagatgtcgagtgggtcacatactgaaggatgtgaaaaccgagtgtgtg
gacagtaatgtgtcatcggatgaagatgataccgcctcttggttacctgttcctcagtcg
ccctcctccccaacaccaactgtctccctcagggtcctgcccagcctttctactcaggac
atgaagactagagacaagcctgagctgggtgagaaggacctcacagccatgttacatagg
cacagagagaagagaaaacgacaaccagatcaccctgacctcattacctccgaccttcat
cttggtgacgtcatgtcacgtgtgaacattggcagaaaaggatccattacgaatgtcttt
gacctggtgctgcctaagaagaagataaaggaggagaagagaaagaaaaagatgcgtccc
attaaaattgaatctgaggaggtgtgtgacgttctgatgtcagcagtttcagtgaatccg
gctctcgctgacacccccgctgctctggcacaaagcattaaagaagagcccatggatgag
tcccagaacagccctgaattggtggaggaaatcgccatcagtttttttcatttgctaaag
gatgttctgagattagaagggctggcaacatcctccatggtggaggagaaagtgcaacag
tggcaatcatctccagcaagcacactaaacccttggtactctatggccccctgctggtca
gagtcggtggtgcctgctctacagtttcttgctggagagagcaaatctggtgtgatggct
ctgcccactggcttcatacctttagtggagtttaaggaactaacacagcagtggaaatgg
ataggcctaaatccagatggagacaaagacctgagtgccctttgccagttatggttggag
tcaaaggatcatgtggttgtcgtaaagcaagaaggagaagaaaccgcagagcttactcca
ccaacaccaagagtgtggacagattacgtggtgagacctagtacgggagaggaaaggcat
gtttttcaagagcaggagcagcagcgttatgatcagccacacaaagccttcacttaccga
atgcacggctttgagtctgtggtgggaccagtcaagggagtttttgataaggagacatcg
ctcaataaagctcgagagcattccttactgcgctcggatcgacccgcctatgtcaccata
ctgtctcttgtaagggatgctgctgccaggctgcccaacggagagggtaccagagctgag
atttgtgagttactcaaagactcccagttcctggcccctgatgtcaccagtgcacaggtc
aacactgtggtgagcggtgcccttgaccgcctccactacgagaaagacccgtgtgtgaaa
tacgacatcggccgcaagctctggatctacctccacagagaccggagccaggaggagttt
gagagaatacaccaggctcaagccgcagctgccaaagccaagaaagctctccagcaaaag
ccaaaaccagcccccaagcctaaggctggcgggaaagagccagggagtaaaaatggtgct
gtcgaggctgctcagggctcaggtaccgaaggagtcgccgttaaccccgccagcttacct
caacctccctccacccccacaccaagcacccccggaaccccaaaatcactcctcccgcac
gcagcagctacgccaacaaaagtcagtgctccagatcccaccaaaaccagccccagtgtc
ttgttggtatcgcctcctcccatgccccagttaggatcgctgctatctgccagtaagcca
caggtttcccagcatgccccagcacagcctgcgactcgggtggtggcacactcggctgcc
gccggctctctgcctcaggtgcgagtggtcactgcacagcctggcatttcaacctcctct
gcggcccagccagcaacattagtgcaccagagcccccatcacatcagggtgccagtctct
gtagcccatggcaagagcatcacacaggcagtggtgactgtaccactaagaggtcagtct
acaggaagccccattcaggttcaggcttcacgtgctcaggccagtcttactgtcccaggt
cttgcctctgctgtcatggtgaccaaacctcaaaccagctcgcccgtcagtcccgcccat
aacccagcgtcacccgctgtactgcagggagtaagcagccagaatattatcaagcaggtt
gcaatcacgggacagttaggtttaaagacccaaagtgggacaggaatccctctcaccgcc
actaacttgcgcattcagggaaaggatgtgctccgtctgcccccgtcttcgatcaccacc
gatgccaaaggtcagacggtgctgcgcatcactccagacatgatggccaccctcactaaa
tccccaatggccaccgtcaaactcaccccagacatgctgagcactgccactggagcgggc
agcaagagcatctctgccactctacatgtgtctccgtcccaggtctcgctcccggcccac
aaggccgctccatctgcaaccgctgagaccctggccgccaaatcgtgtgcctctctaggc
accacgggcacggctaccctcgtaaaggttcaccaggaactaaaggcaacctgtgacacg
gccatccgcctcatgcctgccctagcagtcactatgcctgaccccaaaacccgcactttc
tcgacagtcacctcctctgactcgaaagccggcactactatcagaatagtgccaaacttg
ggagtgatccctcagaaacagggtcagactgtctcaattagcacaaccaccacaggtgca
aagcccatcacggtgtcatcgggagcggctactgttaccatagccaccagtggagtggga
ggagccaaaggtgttacgctcagctccgcagccacgggctctccgctatctctgggtgct
gccgccgcggtcagacaggtgccagtcactgccactgtagtcactacacaagctgggaag
cttcccacgaggatcacagtgcctctctctgtcctcagccaacctttgaaaaacaagagt
atggtctctacccccatactaaaaggcaacatcagcaccaacatcagtaatctgggcaga
aacatcatcctgaccaccatgccggcgggtaccaagataattgctggtaacaagcctgtc
agctttgtgactgctcagcaactgcaacagctgcagcagcagggacaagccacacaggtt
cgaattcagacggtaccagcacagcagctccagcgcacagccagctcgccgaagtccacg
gtgtctacggtggtgttctccaccgctccctcgccgaagacaaatccagatcctcagtaa
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