Triplophysa rosa: 130569915
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Entry
130569915 CDS
T09216
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
tros
Triplophysa rosa
Pathway
tros03420
Nucleotide excision repair
tros04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130569915 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
130569915 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tros03051
]
130569915 (rad23b)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130569915 (rad23b)
Proteasome [BR:
tros03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
130569915 (rad23b)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
130569915 (rad23b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
Ubiquitin_5
DUF1421
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
130569915
NCBI-ProteinID:
XP_057215823
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Position
LG19:21633289..21760289
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AA seq
380 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDGEETVKALKEKIENEKGKDSFPVAGQKLIYAGKILNDDMALK
EYKIDEKNFVVVMVAKPKAAPASASSSAATVTSGASSSTTTTPSPSTAPAVQTPSESPPK
DDKPAEEKPASSAPPPSTPTSSLSNANIFDDATSALVTGQSYENMVTEIMLMGYERDRVV
SALRASFNNPDRAVEYLLTGIPAESEGSVGGAADPVLPSGDAPVVSAGLSSPSITAPSQP
STGSGANPLEFLRNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQM
LNEPIQEAGQGGGGGVGVGVAEAGGGHLNYIQVTPQEKEAIERLKALGFPEGLVIQAYFA
CEKNENLAANFLLQQNFDDD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacactgaagactctccagcagcagacgtttaaaatcgacatcgatggggag
gaaacggtaaaggccttaaaggagaaaattgagaatgagaagggcaaagacagttttcca
gtggcagggcagaagctgatttatgcaggtaaaatcctgaatgatgacatggctcttaaa
gagtacaagatcgatgagaagaactttgtggttgtgatggtagcaaagcctaaagcggca
cctgcatcggcctcttcctctgctgccacggtgaccagcggcgcttcctccagcactaca
acgaccccgagtccttctactgccccggctgtacaaaccccctctgagagcccccccaaa
gacgacaaacctgccgaggagaaaccggccagcagcgcaccgcccccctctacgcccacc
agttccctgtcaaacgcaaatatatttgatgatgcgacatctgcgttggtgacaggtcag
tcgtatgagaacatggtgaccgagatcatgctgatgggctacgagagagacagagtggtg
tcggcgctgagagccagtttcaacaatcctgaccgtgccgtcgagtacctgctcacgggt
attcctgcggagagcgagggaagtgttggaggtgctgctgaccctgtgcttccttcaggt
gacgctcctgttgtgtccgctggcctctcttccccatcgatcactgccccatcacagccc
agcacaggatcaggggcgaatcctctggagttcttgaggaaccagccacagttccttcag
atgagacagatcatccagcagaacccgtctctcttaccagctctactacagcagatcggc
cgagagaacccgcagctcctgcagcaaatcagcagccatcaggagcagtttatccagatg
ctgaatgagcctatccaggaggcgggacaaggaggaggtgggggtgtgggtgtgggtgtg
gccgaggcaggaggtggacacttgaactacatccaggtcacaccccaagaaaaagaagct
attgagaggctaaaagccttgggattcccagaaggactcgttattcaggcctacttcgct
tgtgagaagaatgaaaatttggctgcaaacttccttttacaacagaactttgatgacgat
tag
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