Triplophysa rosa: 130570008
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Entry
130570008 CDS
T09216
Symbol
ungb
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130570008 (ungb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130570008 (ungb)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
130570008 (ungb)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130570008 (ungb)
Prokaryotic type
130570008 (ungb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
130570008
NCBI-ProteinID:
XP_057216041
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Position
LG2:complement(22939174..22942778)
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AA seq
261 aa
AA seq
DB search
MSCKDHVSEENMQLSVEQLQRIEQNRRTALERLAIRNVPVLVGECWRREIGTEFTKPYFT
KLMSFVTMERKCFTVYPSPEQVFMWTTLCAIEDVKVVILGQDPYHHLGQAHGLAFSVLKP
KPPPPSLENIFMELTEDIVGFLRPGHGDLTEWAKQGVLLLNSVLTVRSHQPTSHEGQGWE
LFTDAVIQWLSSNLDSLVFLLWGSYAQRKGRVIDRKRHHVLETSHPSPYSAHLGFFGCRH
FSKTNMFLTKSGKKPIDWTAF
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcaaagatcatgttagtgaggagaacatgcagctcagcgtggagcaactacaa
cggatagagcagaataggcgcaccgctctggaaagactggctatccgaaatgttcctgta
cttgtcggtgaatgctggcggagagaaattgggacagaatttactaaaccttacttcaca
aagctcatgtcatttgttacaatggagaggaaatgctttacggtctatcccagccctgag
caggtgtttatgtggacaactttgtgtgcaattgaagatgtaaaagtggttattcttggg
caagacccctatcaccacctaggtcaggcccatggtttagcctttagtgtgctgaaacct
aaaccccctcctcctagtttggaaaacatatttatggagctgacagaagatattgtaggc
tttctgcgcccgggtcatggagacctcacagaatgggcgaaacagggtgttctgctactg
aattctgtgttgacagtgaggtctcatcagcccacgtcccatgagggtcaaggctgggaa
ctcttcacagatgctgtgatccagtggctcagcagcaatctcgacagcctggtctttcta
ctgtggggctcatatgctcagagaaaaggaagagtgattgacagaaaacgtcatcacgtc
cttgagacttcacatccatcaccgtactcggcacatttgggcttctttggatgcagacac
ttctctaaaacaaatatgttcttaacaaaatctggaaaaaaaccaattgattggactgcc
ttctga
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