KEGG   Triplophysa rosa: 130570030
Entry
130570030         CDS       T09216                                 
Symbol
cul5b
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
tros  Triplophysa rosa
Pathway
tros04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130570030 (cul5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tros04121]
    130570030 (cul5b)
   03400 DNA repair and recombination proteins [BR:tros03400]
    130570030 (cul5b)
Ubiquitin system [BR:tros04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     130570030 (cul5b)
DNA repair and recombination proteins [BR:tros03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130570030 (cul5b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 130570030
NCBI-ProteinID: XP_057216077
LinkDB
Position
LG19:complement(13095461..13103404)
AA seq 795 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIMEWRKFFTQCDILPKPFCKLEITLFG
NQGNNKKSNVEDSIVRKLMLDTWNESIFCNIKNRLHDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNADDRLQIYRENFEKAYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLRE
EEKRAQRYLEARRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETESEYGRSSVT
KGSANSELHLMFSLMDKVPSGIEPVLKDLEDHIMSAGLADMVASAESITTDSEKYVEQLL
TLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCP
ELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILD
ISADSEMEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKRNKLALPADS
VNIKILNAGAWSRNSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFK
NEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKR
QVLSYDPVVGSPKDFTEGTLFYINQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENE
GIVQLRILRTQEAIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKY
IKRDETDINTFIYMA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttattgaagaacaaaggctctctgcagtttgaagacaaatgggat
ttgatgcggcccattgttttgaagttactccgtcaggagtcagttactaagcagcagtgg
ttcgatttgttctcggatgtccatgccgtgtgtttgtgggacgataaaggccctgcaaag
attcatcaggcattgaaagaagacatattagatttcatcaagcaagcacaggcacgagta
ctcagtcaccaagatgacacagccttgcttaaagcctacatcatggagtggaggaagttc
tttacacaatgtgatattctgcctaaacccttctgcaagctggagatcacactgtttggc
aaccaagggaacaataagaagtccaacgttgaagatagcattgttcgaaagcttatgctg
gatacatggaacgagtctatattctgtaatataaagaaccggctccacgacagtgctatg
aaactggtccatgcagagagattaggtgaagctttcgactcccagcttgtcatcggtgtg
cgggaatcatatgtgaacttgtgctccaatgctgacgacagactgcagatctacagagag
aattttgagaaagcctatctagattccacagagaggttctataagactcaggcaccttct
tacctgcaacagaacggagttcagaactatatgaaatatgcagatggcaagttaagagaa
gaagagaaacgtgcacagcgatatttggaagcaagacgtgaatgtaactccgtccaggca
ctaatggagtgttgtgtgaatgcactggtgacatcgttcaaagagacaatcctagccgaa
tgtccgggcatgatcaagcggaatgagacagagagtgagtacggcaggagctctgtcacc
aaaggctctgcgaattcagaactgcacctcatgttctcgctcatggacaaagtgcccagc
ggcattgagcctgtgttgaaagatcttgaagatcacatcatgagcgcaggtctggctgat
atggtggcctcagcagaatccattaccactgactcagaaaagtacgtagagcagctactc
acattatttaaccgctttagtaaattagttaaagaagcatttcaagacgacccacgtttc
ctgactgccagagataaagcatacaaagcagtggtgaatgacgccacaatattcaaacta
gagctccctttaaaacagaaaggggtgggtcttaaaacacagccagaatccaaatgtcca
gagctgctggccaactactgtgatatgctccttagaaagactccattaagtaaaaaactt
acctcagaggaaatagaagccaagctaaaggaagtgctcttggttctgaagtacgttcag
aacaaagacgtctttatgaggtaccacaaagcgcacctgacccgcagacttattcttgac
atttcggcagacagtgagatggaagagaacatggtggagtggctcagggaggtcggaatg
ccggccgattacgtcaataagctggccagaatgttccaggacatcaaagtatctgaagat
ttgaatcagtccttcaaagaaatgcacaaacgcaacaaacttgcactaccagccgactcg
gtcaatataaagatcttaaatgctggagcgtggtctcggaattcagaaaaagtttttgta
tctctgcctaccgaactagaagatcttattcctgaagtcgaggagttttacaagaagaac
cacagcggcaggaaattacattggcaccatctgatgtccaatggcattatcacattcaag
aatgaagttggacagtatgatttagaggtcacgacattccagttagctgtgctgtttgcc
tggaatcaaagacccagagagaggatcagtttcgaaaacttgaaactcgccacagaactt
ccagacgcagagctgcggcggaccctatggtcccttgtagcttttcccaaactaaaacgg
caggtgctgtcatatgatcctgtggtgggctctccgaaagacttcactgaaggcactttg
ttttacatcaaccaagagttttcgttaataaaaaactcaaaagtccagaaaagaggaaag
atcaatttgattggtcgattacaactcaccacagagagaatgcgtgaagaagaaaatgag
ggcatagtgcaactgaggatattacgcacacaggaagctatcattcagatcatgaagatg
cggaagaggattagcaacgcccagctgcagacagagttggtggagatcctaaaaaacatg
tttttaccccaaaagaagatgatcaaagagcagattgaatggttaatagaacacaagtac
atcaaacgggatgagacagacattaacacctttatctacatggcatag

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