Triplophysa rosa: 130570141
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Entry
130570141 CDS
T09216
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130570141 (rnf180b)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130570141 (rnf180b)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130570141 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
E3_UbLigase_R4
C1_2
Motif
Other DBs
NCBI-GeneID:
130570141
NCBI-ProteinID:
XP_057216279
LinkDB
All DBs
Position
LG19:13694964..13698751
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AA seq
480 aa
AA seq
DB search
MEMDASFTTKEQDLSETLEDPTNLRCKKCRRCLIDSTSLLKIATSGEAEAMCSVWHLNVD
TLPDWIVASINQVHWTVGKINCQYCGARLGGFNFINCSKCTCGHNTVVHLSKSRVDQDFK
PQVLLTRPGRSRGHTERRVDRVASSPQTRDSVTELQRTQIQSSLLDTLPSSSTFSSSCDV
LRAVTTGDETELEIASSEDPQIVRTVEVGTDGSLPFESIHPTQLSDYQEILEEHHVDSAS
QSRASPVDPEDVRPRNIVEPSTNVSPIPQPKLSKREKNRLKSLRRKQRKKEHWIQKQQQT
KDLALKWDLTSSDEEEKEGYTCAVCLEVYYSPYKCHPCSHVFCEPCLRTLAKNRPSHTPC
PLCRTLISHVLFQEELNLTTKACFPKVYWSRHETFQKTNYSKWPLPDCPKRFRIFWGFQR
HVGPASRWQFPHRAFGLNVLDLGDMWGWPFDVDFMIISIYSLHWVLALIIFCALCYFFLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatgcttccttcacgactaaagagcaggatctatcagaaacactggaagat
ccaacaaaccttcgctgtaaaaaatgccgccggtgtctcatagactcgacaagccttctt
aagatagcgacatctggggaggctgaagccatgtgcagcgtgtggcatttgaatgttgac
acgttgccagactggattgtggcaagtattaatcaggtacattggacagtggggaaaata
aactgccagtactgtggagctcgcttgggaggtttcaattttataaattgctccaaatgc
acctgtggccacaatacagtcgtgcatctcagtaagagtcgtgttgatcaggattttaaa
cctcaggttctcttgaccagaccaggcagatccagaggtcatactgagagaagggtggat
agggtagcgtcttccccacagacaagagactcagtgactgaactacagagaacacaaata
cagtccagtttgttagacaccttaccctcttcatcaaccttcagctcctcttgtgatgtt
ctccgtgcagtcaccactggtgatgaaaccgaacttgaaattgcatccagtgaagaccca
cagattgtcagaactgttgaagtgggcacagatgggagtttaccttttgaatcaatacac
ccaacacagctatctgattatcaggaaatcttagaggaacatcatgtggattctgcttcc
cagagtagagcctctccagtggatccagaagatgttagacccagaaacatagtggagccg
tcaacaaatgtctctcccatcccacaaccaaagctctccaagagagagaagaatcgcctg
aaaagcttgagaaggaagcagaggaagaaagagcactggattcaaaagcaacagcagaca
aaagatctggctctaaagtgggaccttaccagcagtgatgaggaggagaaggagggatac
acatgtgctgtgtgtttagaggtgtattacagcccctacaagtgccatccttgcagtcac
gtgttctgcgagccttgtttgagaacactggctaaaaatcggccaagccacacaccctgc
cccctctgcagaaccctcatatctcatgtgctgtttcaggaagagctcaatctaactacc
aaggcttgcttcccaaaggtgtattggtcaagacatgagacctttcaaaagaccaactat
tccaaatggcccctgcccgactgtccaaagcgtttccgcattttttgggggtttcagaga
catgtgggtcctgctagtcgctggcagttccctcacagagcatttggactgaatgttttg
gacttgggggacatgtggggctggccatttgatgttgactttatgatcatctctatttac
tctttgcactgggtgctggcgttgatcatcttctgtgcactctgttacttcttccttctc
tga
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