Triplophysa rosa: 130570198
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Entry
130570198 CDS
T09216
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tros
Triplophysa rosa
Pathway
tros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130570198 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130570198 (cnot8)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130570198 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130570198 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
130570198
NCBI-ProteinID:
XP_057216358
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All DBs
Position
LG19:complement(6877865..6880917)
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AA seq
285 aa
AA seq
DB search
MPAAIADTSQIICEVWASNVEDEMRKIRQIIQNYNFIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDTRLPEEEHE
FFQILYLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSSQSQNGISNSSQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgcaattgcagataccagtcagattatctgcgaggtctgggcaagcaatgtg
gaggatgagatgaggaagataagacagatcattcaaaactacaacttcatcgctatggac
acagagtttcccggagtggttgtccgtcctatcggagagttccgcagtactgttgactac
cagtatcagcttctgcggtgcaatgtggaccttttaaaaatcatccagctgggcttgacg
tttatgaacgaagatggagactacccaccaggaaccacaacgtggcagttcaacttcaaa
ttcaatctgacagaggacatgtactctcaggactcgatagacctcctccagaactcgggg
ctgcagtttaagaagcacgaggaggagggcatcgacacgctttacttcgcagaactccta
atgacatcaggcctggtgctttgtgaaaatgtcaagtggctctcatttcacagcggctat
gattttggctacctggtgaagttactcacagacaccaggctaccggaggaggaacacgag
ttcttccagatcttatatctcttcttcccagccatctatgatgtcaaatacctcatgaag
agctgcaaaaacctcaaggggggactccaggaagtggcagaccagctggaactaaaaagg
atcggcaggcagcaccaggctggatcagactcgttgctcactggaatggcttttttccgc
atgaaagagctgttttttgaggacaacatcgacgacgcaaagtactgcgggcggctctac
ggcttgggatcgggttcctcacaaagccagaacggaatctccaactcgtcacaggaggaa
accaacaacaagcactga
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