Triplophysa rosa: 130570212
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Entry
130570212 CDS
T09216
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130570212 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130570212 (nup98)
03036 Chromosome and associated proteins [BR:
tros03036
]
130570212 (nup98)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130570212 (nup98)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130570212 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
130570212
NCBI-ProteinID:
XP_057216394
LinkDB
All DBs
Position
LG19:complement(8409987..8435243)
Genome browser
AA seq
1824 aa
AA seq
DB search
MFGKSFGAPAPFGGGTGGFGTSSTFGQQNAGFGTTGGFGSSAFGTTNNTGGLFGTTQNKP
GGLFGSSTFSQPVTSSTSTGFGFGSPSGTSNSLFGSTNTGGGGLFSQQNNAFSANKPATF
GTFGTSTSTGGLFGTTNTTSNPFGGTSGSLFGSSNFTPAPPGTTIKFNPPTGSDTMVKGG
VTTSINTKHQCITAMKEYENKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGATAAATPST
GTGLFGSSAPNTGFSFGQNKTSFGTSVCVAPGTGAFGTTTGGLFGQPPQQQQQQQQQQQQ
QQQQASSLFKPFGSATTTQNTGFSFGNTNTMGQPNTSSMGLFGNTAASQAGGLFGNTNTS
TAAGFGPGTGLFGQPNTGFGNNLFGNKPAGFGTTTTSAPSFGTATGLFGNKPTLTLGTNT
NPSTFGGFGGTGTGGSLFGNKPATTGLGTGLATGFGTGTGQTSLFGNNQNKLGSTLGSVG
TFGTGFNTGTSTLNFGAPQQPLALTDPGATAAQQAVLQQQINALAYSPFGDSPLFRNSLS
DPKKKEERLKPTNPAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEP
SHTNGAFMPRKSIKKLVLKNLNNSSLYNNSMNREADDLASPSEYPQNGLSLSLDERDTRE
ATVERSGEDDLEVSKFYTNPISKPIPHAQPSPLLQDTITEFNMRGASSHRNGLEASSEEI
SLAEDSIQEERDDELDSQKPPHPAGIVLGRVGYYTIPSMEELGKMLNENGECIVENLTVG
RKGYGSVFFPGEVNLTNMNLDEIVHFRRKEIIVYPDDKEKPPVGEGLNRRAEVTLDGVWP
NDKTTCCQIKSPERLNATNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDS
DEEEEVAPSKVDLKKLKTAVPPGIQQLHLNQQPVPPQAQSTAVFELLSRVSELDSDMADI
TQEPATDSVLGDEDGERFSLESKLRAETPAEHEPISASSQMATAMGINPHTLQIMKASLF
AEDDECDLFQEHGSSKLIQDVASAKVLLSRGGRQSIGGLLQTKFTSGGALFSHLPEAPFG
GIPQKLGKSLASDTPWPSLGPSFLLPAPPPEPTLRTVGARRLGGPVPLESSVTLGKGRLL
MDAALFRGRSFRVGWGPNWTLVHSGDQLSVTEAMKEQATESMGFGFLPKPTKTKPITESP
FKVRVEKVVGLEPKESAESLALYHKQLEIGLKHSTIRTKDPCPFIQPASGADALHEYAEW
IVVVNKDMGAGDAVLAHWRQVWTLCAALWGHLGDQDMETEEYSEYQQQLERRRSFSHWLS
ESAAQRIEEEAGLALQRNHAEAIFSYLTGHSISKACKLAQKNGDHRLSLMVSQAVGSQYC
RDLLALQLSDWNRMQTDSFIDEERLKIFALLAGKPVWQSTDFCINVCSELDWKRCVAVHL
WYMLPPTASVADALAKYESAFQGSEERKKYACLPLPPYVDELELLDLDEEMEEKESKRSL
YDICFHLLKLYSDRHYSLQQLLDPSTVTADRLDYRLSWHLWNVLQALNYNHLSTSCQGLM
HASYAAQLERAGLWEMAVFVLLHIPDSGRREKAVREMLNLHCSLEETEESMEKEQFLIEK
LLIPIQWIHQAKAIRACREGDKHREALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLL
EFLEGLAVPDRSVQIQGWDTSGRVYLDYVHVIQSLHDIQQTESPGYELERLHTEVMSLCG
RIELLPCAKAKDRLAQSEMAKRVANIVRVVLSLHQGGEGTPDPRHIPLCQLAPPIGRLPM
PEDYALEELRNLTQSYLQQYVVGH
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcaaatcttttggtgctcctgctccctttgggggcgggacaggaggatttggg
acttcatcaacatttgggcaacaaaatgctggatttggaacaacaggtggctttggttcg
tcagcatttgggacgacaaacaacacaggaggactttttgggaccacgcagaacaagcct
ggtggtctctttggctcgagcactttcagtcagcctgtcacatcttccaccagtactgga
tttgggttcggttcccccagcggtacatcaaacagcctttttggaagcaccaacaccgga
ggtggaggcttgttttcccagcagaataatgcattcagtgccaacaaaccagccacgttt
ggcactttcggaaccagtaccagtactggaggattattcgggacaaccaacaccacgtcc
aacccttttggaggaacatcaggctccttgtttgggtcatcaaatttcacccctgcccca
cctggcaccacaatcaaattcaatccaccaactgggagtgacacaatggtgaagggtggt
gtgacgaccagtatcaataccaaacaccagtgcatcactgccatgaaggaatacgagaac
aaatccttggaggaactgaggtttgaggattaccaggcgggaagaaaggggccctccaac
cccatggcagctggcacaggtggtctgtttggagccacagcagctgctacacccagcact
ggtactggtctctttggttcctctgctccaaacactggcttcagctttggccagaacaaa
acctcatttggcaccagtgtgtgtgttgctccaggtacaggggcatttggcacaactaca
ggaggtttgtttggtcagccgccgcaacaacaacaacaacaacaacagcagcagcaacag
cagcagcagcaagcttccagtctcttcaaaccattcggctcggccaccaccacacaaaac
actggtttctcctttggcaacaccaataccatgggtcagcccaacaccagcagcatgggt
ctgtttggcaataccgctgcctcacaggctggagggctgttcggaaacaccaacacaagt
accgctgcaggctttggaccaggcacggggctcttcggtcaacctaacactggatttggg
aataatctctttggtaataagccagctggatttggtaccaccaccaccagtgcaccctcc
tttggcacagccactggtctgtttggaaataagccgacgctcactctagggactaacaca
aacccatcaacctttggtggatttggtggtaccggtactggcgggagtctttttggtaat
aaaccagctacaacgggcctgggaacaggattggcaactggctttggaacaggaaccggg
cagacgtcattgtttggaaacaaccagaacaagctaggctcaaccctgggctcagtgggt
acattcgggactggttttaacactggaaccagcactctgaattttggtgcaccccaacaa
cctttggctttgactgatcccggcgcaacagctgcgcagcaagccgtacttcagcagcag
atcaatgcgctggcatactcaccttttggagactcgcccctcttcagaaactcgctgtct
gaccccaaaaagaaggaagagcgcctgaagcccacaaatccagctgcccagaaagccctg
acaacccccacccagtacaaactgacccctcgtcctgccacccgagtgcgtcctaaagct
ctgtcctcctctggctcctctaaatcacagctgtttgatggacttgatgatgatgaaccc
tcacacactaatggagccttcatgcctcggaagagcataaagaagcttgtcttgaagaac
ctgaataacagcagcctgtataacaactcgatgaacagagaagctgatgacctggcctcc
ccttcagagtacccacagaatggactcagtctgagtctggatgaaagagatacaagagaa
gcgacagtggagagaagtggggaagatgatctggaggtctccaagttttacaccaaccca
atctccaaacccattccgcatgcccagccgagccccttactgcaagataccatcactgag
ttcaacatgcgcggagcttctagtcatcgcaacggcctggaggccagcagtgaagagatc
tccctggcagaggattccattcaggaggaaagagatgatgagctggactctcagaaacct
cctcatcctgctggcattgttcttggccgtgtgggctactataccatcccatctatggag
gagctgggaaagatgttgaatgagaatggagaatgtattgtggagaacttaactgttggc
aggaaaggctatgggtcagttttcttccccggtgaggtgaacctgaccaacatgaacctg
gatgagattgtgcacttcaggcgcaaggagataatagtgtaccctgatgacaaagagaaa
cctcctgttggagaaggtctcaacagacgggcagaggtgactctagatggtgtctggccc
aatgacaagaccacgtgctgtcagataaagagccctgagagactcaatgcaacaaactac
gagggccggctggaagctgcctcacgcaaacaaggtgctcgcttcctggagtaccgtcct
gaaactggctcgtgggtgtttgaggtggcccacttctcaaagtatggcctacaggattca
gacgaagaggaggaagtggctccatccaaggttgacctgaagaaactgaagacagccgtt
cctcccggcattcagcagcttcatctgaaccagcagccggtgccaccacaggctcagagt
actgccgtttttgagctcctcagccgtgtgtcggagttggacagcgacatggccgacata
acccaagaacctgccacagacagcgttttgggggacgaggatggagagagattctcactg
gagagcaagctcagagccgagactcctgcagagcacgagcccatttcggcctccagccaa
atggcgacggcgatgggcatcaaccctcataccttgcagattatgaaggcctctctgttt
gctgaagatgacgagtgtgatttgtttcaagaacacggttcttcaaagctcatacaagac
gtggcctccgccaaagttttgctttctcgaggtggtcggcaatcaattggaggcctgtta
caaaccaagttcacctcaggtggagcacttttttctcatttgccagaagcaccttttggt
ggaatacctcagaagcttggcaagtcgcttgcttcagataccccgtggccgtcattgggc
ccctcctttcttttgcctgcccctccccctgaacctaccctacggaccgtgggagcccgc
agattagggggacctgtacctctagagagctctgtaacactaggaaaaggacgtctgctg
atggatgctgctttgttcagaggacggtctttcagagtgggctggggacccaactggacc
ctggtgcactctggagatcaacttagtgtgacggaagcaatgaaggaacaggcaacagaa
agcatggggttcggattcttgcccaaaccaaccaaaaccaaaccgatcactgaaagtcct
tttaaagtgcgtgtggagaaggtggtgggtcttgagcccaaggagtcggcagagagtttg
gctctgtaccacaagcagttggaaattggattgaagcacagcacaatccgaaccaaggac
ccttgtcctttcatccaacctgcgagcggagcggatgctctgcatgagtatgcggagtgg
attgtggtggtcaacaaagacatgggagcaggcgatgctgtcttggctcactggcggcaa
gtttggactttgtgtgctgctctgtggggtcatctcggtgatcaggatatggagactgag
gagtattccgagtaccagcagcagctcgagcggcggaggagcttctcacactggctctca
gagagcgcagctcagcgtatcgaggaggaagcgggtctagccctccaacgcaaccatgct
gaggccatattcagttaccttactggccactccataagcaaggcctgcaaactggctcag
aagaatggggaccatcgcctttctctgatggtgtctcaggctgtgggctctcagtattgt
agagatcttttggctctgcagctcagtgactggaacagaatgcagaccgactccttcata
gatgaggaaaggctgaaaatctttgctctgctcgcaggcaaaccggtgtggcagtcaaca
gacttctgtataaacgtgtgctctgagctcgactggaagcgctgtgttgctgttcatctt
tggtacatgctgcctcccactgcgtctgtcgctgatgctcttgctaaatatgaatccgcc
tttcagggttcagaggaaaggaagaagtatgcttgccttcctttacctccctatgtggat
gaattggagttactggatttggatgaagagatggaggagaaagaatctaaaaggtccctc
tatgacatctgcttccacctgctcaagctttacagtgacaggcattatagcctacaacag
ctacttgatcccagcacggtaactgctgatcgtctggactatcggctgagctggcacctg
tggaacgtgttgcaggctctcaactacaaccatctgtccacctcatgccagggcttgatg
catgccagctacgctgcccaactagagagagcaggactctgggaaatggctgtctttgtg
ttgctgcacatacctgactctggacgtagagaaaaggcagtacgggagatgctgaacctt
cattgctccctggaagagacggaagagtcgatggagaaggagcagtttctcatcgaaaag
ttgctcatccccatacagtggatccatcaggccaaggccatccgtgcctgcagagaggga
gacaaacaccgggaagccctgcatctctataaggccggccactggaatcactgccatcgg
ctggtcattcaacatctggcatcagattgcatcattaatgataatcataagtatcttctg
gagttcctggaaggattggcggtaccagaccgcagtgttcagattcagggctgggacaca
tctggacgggtttacctcgattacgtccatgtcatccagtccctgcacgacattcaacag
accgaaagccctggatatgagctggagcgattacatacagaggtgatgtctctgtgtggc
aggatagagctcctcccttgcgccaaggctaaagaccgactcgcgcaatcagagatggcc
aaacgtgttgctaacatcgtgcgggtggtcttgagtctccatcagggtggtgagggcacc
ccagatcctcggcacatccctctctgtcagctggccccgcccattggacgtctgcccatg
ccggaggactatgctttagaggaactccgcaaccttactcaatcttacctgcagcagtat
gtagtcggtcactaa
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