Triplophysa rosa: 130570292
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Entry
130570292 CDS
T09216
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tros03016
]
130570292 (pus1)
Enzymes [BR:
tros01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
130570292 (pus1)
Transfer RNA biogenesis [BR:
tros03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130570292 (pus1)
Prokaryotic type
130570292 (pus1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
130570292
NCBI-ProteinID:
XP_057216519
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Position
LG19:16486949..16489903
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AA seq
423 aa
AA seq
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MLKLCRVLDVFSARRLIPTLKIKGWPDPILTSSGFCLSGKMSEDSADVQNKALKRQADDA
LVEDKHEDKKLKTDQDEQSADRKYPKKKVAMLIAYSGKGYYGMQRNAKNSQFRTIEDELV
AALIKAGCIPEGHGEEMKKMSFQRCARTDKGVSAAGQVVSLKLWMIENILASINAHLPPQ
IRILGYRRVTGGFNSKNNCDARTYSYMLPSVAFSPKDFNQEDTSFRLNSETLQKVNRLFG
VYKGTHNFHNFTSQKGPRDPSAKRYITQMSCGQPFVKQEAEFAVITVRGQSFMMHQIRKM
IGLVIAVVKGYASEEVIERSWGEEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGIHDTLE
WTEEESAIAEFKEKHIYPSIVETELNEKSMVNWMATLHIHDFEATATGNQDRKDDDDDGN
ASD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaattgtgtcgggtccttgatgttttttcagctcgaagattaataccaactctc
aaaatcaaagggtggccagatcctattttaacatccagtgggttttgcttatctggcaaa
atgagcgaggattcagcagacgtacaaaacaaagccctgaaacgacaagcggacgatgcg
ttggttgaggataagcacgaagacaaaaagcttaaaacagatcaggatgagcaaagtgcg
gacaggaaataccccaagaaaaaggtggcaatgctgattgcatattcgggcaagggctac
tacggcatgcagagaaatgcaaagaactctcagtttaggaccattgaggatgaattggtc
gctgctctgataaaggcagggtgtattccagagggccatggagaagagatgaagaagatg
tctttccagagatgtgcacgaactgataagggcgtttctgctgcaggtcaagttgtgtct
ctgaagctgtggatgattgaaaacatcctggccagcatcaatgcccatctaccccctcaa
ataagaattttaggttacagaagagtcacaggtggtttcaattccaaaaacaactgtgat
gccagaacgtattcttacatgcttccgtcagtcgctttctccccaaaagacttcaatcag
gaagacacgtcgttccgtttgaattcagagacccttcagaaggtcaaccgtttgttcggc
gtgtacaaaggcacccataacttccacaacttcacctcgcagaagggtccccgggacccc
agcgctaagcgctacatcacccaaatgtcctgcgggcagccctttgtaaaacaagaagct
gagtttgctgtcatcacggtaagaggccaaagcttcatgatgcatcagatccgcaagatg
attggtctggtgatcgcggtggttaaaggatatgcaagtgaggaggtgatcgagaggagc
tggggggaggagaaggttgatgttcccaaggcgcccggcctcggattagtgctggagaga
gtgcactttgatcgctataacaaacgttttggaggagatggtatccatgatactctagaa
tggactgaggaagaatctgctattgctgaatttaaggagaagcacatttatccaagtata
gtggagactgaactcaatgagaagtctatggtgaactggatggccacactccacatccat
gatttcgaagcgacagcgacaggaaaccaagatcgcaaagatgatgacgacgatggaaat
gcatctgactga
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