Triplophysa rosa: 130570345
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Entry
130570345 CDS
T09216
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a isoform X1
KO
K24901
homeobox protein orthopedia
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130570345 (otpa)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130570345 (otpa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130570345
NCBI-ProteinID:
XP_057216596
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Position
LG19:19544153..19548976
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AA seq
332 aa
AA seq
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MLSHADLLDARLGELSTPNSGLQLYWMKDAAAELLGHREALKCRLGGGGADPGHPGELAP
GSDSVEGTTLLPGEDINNAGSNPQGVAVNSKEQEKQQQQQQNPTQSGGQQSQKQKRHRTR
FTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFR
SPGTLLPTHHGLPQFPSAAAAAAAMGDSLCSFHANDTRWAAAGMPGVSQLQLPPSLGRQQ
AMAQSLSQCSLGAGPPHNSMSLSNMSSNGSGLQSHLYQPTFPGMVPASLSGPTNVTGSPQ
LCSSPDTDVWRGTSIASLRRKALEHTVSMSFT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcacgccgacctgctggatgctcgcctcggtgagttatcaacgccaaactcc
ggtctgcaactctactggatgaaggatgcggcggcggagcttttaggtcacagggaggca
ttgaagtgcaggctgggaggcggtggcgctgacccgggccaccccggagaacttgccccg
ggctccgattccgtggaggggaccacccttctccccggagaagatatcaacaatgctgga
tccaatccgcagggtgtagcggtgaacagtaaggaacaagagaagcaacagcagcagcaa
cagaatcccacgcagtctggcgggcagcagtctcaaaagcagaaacgccaccggactcgg
tttactccggcccagcttaacgagttggaacgcagcttcgccaaaacccactacccggac
atcttcatgcgcgaagaactcgcgctccggatcggtctgacagaatcacgcgtgcaggtc
tggtttcagaacagacgcgctaagtggaagaagcgcaagaagaccaccaacgtgttccgc
tctcccggcacgttgctgcctactcaccatggtctaccgcagttcccctccgcagcggcg
gccgcagcagcaatgggcgacagtttgtgctccttccacgctaatgacacccgctgggcc
gcggctggaatgccaggagtctcccagctgcagttaccgccctctctaggccgacaacaa
gccatggcacagtctctctcccagtgcagcctgggcgccggaccgccacacaactccatg
agcctgtccaacatgtcctccaatggttccgggcttcagtcccacctctaccaacccacc
ttccccggtatggtgcccgcctcgctgtctggcccaaccaatgtgaccggctctccgcag
ctttgtagctccccggacactgacgtctggagagggacgagcatcgcgtcgctgcgccgc
aaagcgctcgagcatacagtatccatgagtttcacctaa
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