Triplophysa rosa: 130570412
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Entry
130570412 CDS
T09216
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130570412 (supt6h)
03036 Chromosome and associated proteins [BR:
tros03036
]
130570412 (supt6h)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
130570412 (supt6h)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
130570412 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
S1
HHH_9
Tex_N
HHH_3
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
130570412
NCBI-ProteinID:
XP_057216692
LinkDB
All DBs
Position
LG19:complement(11250780..11264280)
Genome browser
AA seq
1723 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEDDEEEEEENTEDQDEHGNLRGLIDDGDVE
EEEEGGREQQSGREASDSDEEVRHRRRKRSYDDYLDDDDLDLIEENLGVKVKRRKKKYSR
VKTMDDEGEDDEKDMIADEIFTGDGDGDGELEDGEAVSTRPPGDDEEEEDDEESDIDDFI
VDDDGQPITKKKGKKYSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQDDESW
DRPKKQTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDE
LEEEAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEV
PFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPD
KPLSDATRPLDTGDMERLKDVQALDELGDVYNHFLLYYGRDIPKMQNAVKSSKKKLKKIK
EVSEEDGEEVEVEEEEEEEEQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLSPEQFGEN
LRDSYQRHETEQFPAEPLELAKDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQT
FQERAKINIKPTKKGKKDVDEAHYAYSFKYLKNKPVKELSGDQFLKMCLVEDEGLLTIDI
CIDLLGVKGFGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERALQQFLYPQMAKELK
NKLIAEAKENIVKSCCKKLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGR
DTPVFCSLINGEGEVVDFLRLPYFLKRRNAWREDEREKKLQDIENLKKFLLSKKPHVVAV
AGENRDAQMVMEDIKRTISELEQDSSLPAVAVELVDNELAVLYMNSKRSEADFRDYPPLL
RQAVSVGRKIQDPLVEFAQVCSTDDDILCLKLHPLQEHVVKEELLGALYCEFINRVNEVG
VDVNRAIAHPYTQSLVQFICGLGSRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFIN
CAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALE
EILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVF
NLLTKETPESFYIGKLITCVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELS
EVWNHFDSGSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKI
DIEKFNVDLTCRTSDLSDKNNEWKLPKDTYYDFDAETDDVKQEEEHKKKLQRTTYIKRVI
AHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKEN
AFSLGHTLWINNEEFEDLDEITARYVQPMAAFARDLLSHKYFLECNGGERKKMEELLVRS
KKEKPTFIPYFVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQMFSTVNSLFRW
FKDHYQDPVPGVTPTSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFNAIAAVT
GQGQNPNTTPAQWASSQYGYSGGSSGGGGGGSSSAYHVFATPQQPIATPMMTPSYSYTTP
GQQQAMATPQYPSSTPQSSHGHHPHSSSTPSSSSSRVRTPKSSSHTAVDWGKMAEQWLQE
KEAERRKQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgagagcgaggctgaggagtcagaggaggagtttgaggaaaaggat
ctgaagcccaagaagacacaaagatttatggaagatgatgaagaggaagaagaagagaat
actgaagaccaggacgaacacggtaacctgagaggacttatagatgatggtgatgtggaa
gaagaggaggaaggagggagagaacagcaaagtgggcgagaggcaagtgactctgatgaa
gaggtccgccatcgccgcaggaaacggagttatgatgactatctggacgatgatgatctg
gaccttatcgaggagaatctgggagttaaagtcaagaggaggaaaaagaaatactcgcgt
gtgaaaaccatggatgatgagggggaagatgatgagaaggacatgatcgctgatgagatc
ttcactggggatggagacggagatggagagttggaggacggagaggctgtgagcacacga
cctccaggggatgatgaagaggaggaagatgatgaggaatcagatatagacgatttcatt
gtggatgatgatggacagcccatcacaaaaaagaagggaaagaaatattctggctacact
gatgctgccttgcaagaagctcaagagatttttggcggtgactttgactttgctgagttt
gacactgaggcgtacgaccatgctgaagaagaagaggaggatcaggatgatgagtcatgg
gatcggccgaagaaacagaccaagaggagagtcggccgtcgtagcatctttgagatctat
gagcccagtgagctagagagcagccatatgacggatcaggacaatgagatccgctccaca
gacatgccggagagattccagttgagggccattcctgtgaaacccgccgaggatgacgag
ctggaggaggaagctgaatggatctacaggaatgcattttccacaccgaccatctccatg
caggaaagcacagactatctggatcgtggaacaaccactaatttcagcaggaagggcccc
agcaccattgctaaaatcaaagaggccctgaatttcatgaggaaccagcacttcgaggtt
cccttcattgcattctacaggaaggagtatgtggaaccggagttaaacatcaatgatctg
tggaaggtgtggcagtgggatgagaagtggacccagctgaagaccaggaagcagaatctg
acacgtctttttcagcgaatgcaatcctatcagtttgagcagatctcggctgacccagac
aaaccgctgtctgacgcgacgcgtcctctagatactggtgatatggagagactcaaagat
gttcaggctcttgatgagctgggcgatgtatacaaccacttcctgctctactatggtcgg
gacattcctaagatgcagaatgcagtgaaatcaagcaaaaagaagctgaagaagatcaag
gaagtgtcagaggaagatggtgaggaggtggaggtagaagaggaggaagaggaggaggag
caaaagggaccggatctgaaacaagcctccagaagggatatgtacagcatctgccagagc
gctggccttgacggtcttgccaaaaagtttggtctgtcaccagagcagtttggagagaat
ttgcgagacagttatcagaggcacgaaacggagcagttccctgcagagcctctggagctg
gccaaggactatgtgtgcagccagtttaacactcctgaggctgttctggaaggagctcgc
tacatggttgccatgcagattgcccgtgaacctttggtcaggcacgtgctcagacaaacc
ttccaggagagagccaagattaacattaagccaactaagaagggcaagaaggacgtagat
gaagcacactatgcctattccttcaagtacctgaagaacaagcctgtgaaagagctcagc
ggagatcagttcttaaagatgtgcctggttgaggatgaaggcctgctcaccatagacatc
tgcattgaccttttgggagtcaaagggtttggagatcagacttactttgatgagatcaag
cagttctactaccgagatgagttcagtcatcaagtgcaggagtggaataagcagagaacg
ctggccattgaacgcgccctgcaacagttcctgtatcctcagatggccaaagagctgaag
aacaaactcatcgctgaagcaaaggagaatattgttaagtcatgctgcaagaagctgtat
aactggctgaaggtggcgccataccggcctgatcaacaggtggaggaggatgatgattta
atggacgagtcacagggaaagggcatccgtgtgctgggggtggcttttgcttccggccga
gacacaccagtattctgttccctcattaacggtgaaggagaggtcgtagatttcctcagg
cttccttatttcttaaagaggagaaatgcttggagagaggatgaaagagaaaagaaactt
caagacattgaaaacctcaagaagttcctccttagcaagaagccacatgtcgtcgctgtt
gccggggaaaatcgtgatgctcagatggtgatggaagacatcaagcgtaccatcagtgag
ctggagcaggactcttctttgcccgcagtggcagtagagctggtggacaatgagctggct
gttctctatatgaacagcaagagatctgaggcggacttcagagactaccctccgctgctt
cgccaggctgtgtctgtaggccgtaagatacaggacccactggtggagtttgcccaagtt
tgtagcaccgatgacgacatcctatgtttgaaactacatcccctacaggaacatgtggtg
aaagaagagctgctgggggctctctattgcgagtttataaaccgagtgaatgaagttggt
gtggatgtgaaccgagccattgcccacccatacacacagagtctggtccagttcatctgt
ggtcttggatcaagaaaaggctcacacctgctcaagattctaaaacagaacaacactaga
ttagagaaccggactcagttggtcaccatgtgccatatgggacccaaagtcttcattaac
tgtgccggcttcatcaagatcgacacagcttctcttggagacagcactgactcctacatc
gaagttctggacggttctcgagtgcacccagaaacgtacgagtgggcacggaaaatggct
gtggatgctctggagtacgatgagtctgcagaggatgccaacccagctggagctctggag
gagattctggaaaacccagagaggctgaaagatttggatctggatgcctttgctgaggaa
cttgagagacagggttatggtaataagggaatcacgctgtatgacatccgtgcagagctc
agctgtagatataaagatttacgagctccatacagaccccccaacactgaggaggtgttc
aacttgctcactaaagagacgcccgagagcttctatatcggtaaactgatcacctgtgtt
gtgaccggcatcgctcatagacggccgcaaggtgagagttacgaccaggctatccgtaat
gatgagacgggactatggcagtgtcctttctgccagcaggacaactttcctgagctcagt
gaggtgtggaatcactttgacagcggctcctgccctggtcaagccattggggtgagaaca
aggttagacaacgctgtcatgggctttattccaacgaagtttctcagcgacaaggtagtc
aagcatccagaagagagggtcaaggttggcatgaccgtgcactgccgcatcatgaagatt
gacatcgagaagttcaacgtggacctcacttgcaggacatctgacctgagcgacaagaac
aacgagtggaagcttcctaaagacacctactatgactttgatgccgagacggatgatgtt
aaacaagaagaggaacacaagaagaaactacagagaaccacttacatcaaacgtgtgatc
gcccacccgtcgttccacaacatcaacttcaaacaagcagagaagatgatggaatccatg
gaccagggtgacgtggtgattcgacccagcagtaagggagagaaccacctgacagtcacg
tggaaggtggctgatgggatctatcagcatgtggacgtgcgcgaggaaggaaaagagaac
gcctttagtcttggacatacgctctggatcaacaatgaggaatttgaagatctagatgaa
atcacagccagatatgttcagcccatggctgcgtttgcacgagatctgctcagtcacaag
tacttcctggagtgcaatggaggtgaaagaaagaaaatggaggagctccttgtaaggagc
aagaaagagaagccaacattcatcccctactttgtttcagcttgtagagatctgccaggc
aaatttctgctgggttaccagcctagaggcaagccaaggatagaatatgtaaccatcaca
ccggacggctttaggtatcgctcccagatgttctctacagtcaacagtctcttccgctgg
tttaaggaccactatcaggatcctgtgccgggcgtcacacccaccagcagcagaactcga
actcctgcatcagtgaatgccacacctgccaacattaacattgcagacctgaccagagcg
gttaatgctctcccgcgaaacatgacgtcacagatgttcaacgcaatcgcagcggtgacg
ggtcagggccagaaccccaacacaacaccggcccagtgggcctccagtcagtacggttac
agcggaggcagcagcgggggaggaggcggcggcagcagcagcgcttatcacgtgtttgca
acaccacagcaacccatagccacgcccatgatgacacccagctactcttatactacgcct
ggccagcagcaggccatggccacgccccagtatcccagcagcaccccacagtcctcacat
ggacaccatccacattcttcctcaactccttcatcatcttcatctagagtccggacgccc
aagtcgagttcccacacagctgtggattggggcaagatggccgaacagtggctgcaggag
aaagaagccgagcggcgaaagcaaaagacgccccgcatgacgccccgcccttcacccagc
cccatgatcgagagcacgcccatgtccatcgccggagacgccacccccctcttggacgag
atggaccgatag
DBGET
integrated database retrieval system
