Triplophysa rosa: 130570529
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Entry
130570529 CDS
T09216
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tros
Triplophysa rosa
Pathway
tros04080
Neuroactive ligand-receptor interaction
tros04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130570529
04082 Neuroactive ligand signaling
130570529
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130570529
Ion channels [BR:
tros04040
]
Ligand-gated channels
GABA-A
130570529
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
130570529
NCBI-ProteinID:
XP_057216850
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Position
LG19:complement(3083561..3131160)
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AA seq
516 aa
AA seq
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MKSARELRALSIIITSSSLQIKVSTVHISEHLLAPEQKNHLQKFDDKDFSLEDSSIGGMM
WGGRGVAWLWIWACLLVTNVLAGKSSSQNTDEQKDNTTVFTRILDSLLDGYDNRLRPGLG
ERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIW
TPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPL
KFGSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQYDLMGQTVDSGVVQSSTGEYVVMKT
QFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARN
SLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKESLL
KKNNTYTAATATSFAANIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNSVSKID
RIARIAFPLLFGTFNLVYWATYLNKKPKIQGALQPH
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgcgcgagagttgcgcgcgctcagcatcatcatcaccagcagcagcctccaa
atcaaagtcagcacagttcacatctcagagcatcttctcgcacccgaacagaaaaaccat
ttgcaaaagtttgatgataaggacttttcgcttgaggattcatcaattgggggcatgatg
tggggtggaagaggagtggcttggctgtggatttgggcctgtttactggtgactaatgta
ctggctggaaaaagctccagtcagaatacagatgagcagaaagacaacaccacagttttc
accaggattctggacagcctcctcgatggctatgacaaccgtctgaggcccggccttgga
gagcgtgtaaccgaagtgaagactgacattttcgtgacaagcattggaccggtgtcagac
catgacatggagtacaccatagacgtgttcttcaggcagagctggaaggacgagaggctt
aagttcaaaggtcccatggcagtgcttcgtcttaacaatctgatggccagcaaaatatgg
acccccgacacgtttttccacaatggcaagaagtcagtcgcccataatatgactatgccc
aacaaactcttacggattacagaagagggcactctactctacaccatgaggctcactgtc
agagctgaatgtcccatgcacttagaagacttcccgatggacgcccatgcttgccctctc
aaatttggcagctatgcctacacaagggctgaagtggtgtacgtgtggacacgaggggca
gcacagtccgtggtggtggctgatgatggctcccgtctcaaccagtacgatttgatggga
cagaccgttgactcgggcgttgtgcagtccagtactggagagtacgttgtcatgaaaaca
caattccaccttaaaaggaagatcggatactttgtcatccagacgtatttgccatgtatc
atgacggtgatcctctcccaggtatctttctggctaaacagagaatctgtccctgccaga
actgtgtttggagtgaccactgttctgaccatgacaaccctgagtatcagcgccagaaat
tctctccccaaggtggcctacgctacagccatggactggttcattgctgtttgctatgcc
tttgtcttctcagctctcattgagttcgccacggtaaactacttcacaaagaggggttac
gcatgggatgggaaaagtgtggtgccagaaaagcaaaagaagaagaaggagtccttactg
aagaaaaacaacacctacaccgctgcaacggccacatcttttgctgccaacattgccaga
gaccctggtttggcaactattgctaaaagtgcccccccacccccaaccgagcccaaggaa
gagcccaagcccaaaccacctgaggccaagaagaccttcaacagcgtgagcaagattgat
aggattgccagaatagcgttcccgctgctcttcggaacctttaacctggtgtactgggca
acttacttgaataaaaagcccaaaatacagggtgccctacaaccccactaa
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