Triplophysa rosa: 130570543
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Entry
130570543 CDS
T09216
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130570543 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130570543 (sart1)
04121 Ubiquitin system [BR:
tros04121
]
130570543 (sart1)
Spliceosome [BR:
tros03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
130570543 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
130570543 (sart1)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130570543 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
130570543
NCBI-ProteinID:
XP_057216875
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Position
LG19:complement(10718599..10727732)
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AA seq
776 aa
AA seq
DB search
MGSSKKHKEKEKERDPEDRHREHKKHRHKDRDKEKDREREKRKRSRSRERSSRGTEKESR
GKAEKSNGEPRVKKEKADAAYEESGDPGPKSASGDASLSIEETNKLRAKLGLKPLDLNES
KKEAGTKEEPLVAETINPVQIRQQAEMREKMAALKEKRLLNQKLGKVKTLGDDEPWLDDT
AAWVEKSRKMAKEKELAEKRAKLLEEMDEEFGVSNLVEQEFAQEKQESYSSRDLRGLKVQ
HKMDSFKEGELVILTLEDKGVLEEKEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEEE
SVDDMVNFKEKSVLSKYDEEIEGEKKKSFRLSAGGFVGGERERELQAIRENLRSQAQSLD
MPSLTLATEYYTPQEMVGFKKTKCKVKKIRKKEKPRSADDLLLDDTRSTDFGSRSRGRGR
READEEGKTLENVAMETTSRVNDVLLRSDDIRMADMDISEDEDFALPEPAAIEEDEAEQE
LQKQLEKQRKLRQKLMLKDSGERVAEHMNRLATDADDDNDPDKKNNIVFNATSEFCRTLG
DIPTYGLSGNREDQEDIMDFEKEEEKEGAGDSDSDMDDNVGWSTVNLDEEQKHTDFATAS
TTILDEEPIVKSGLAAALLLCKNKGLLDTQMQKMARVKALKPAPTDDNYCIEDKMNIDDK
YSRREEYRGFTQDFKEKDNYKPDVKIEYVDESGRRLTPKEAFRQLSHRFHGKGSGKMKTE
RRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatcaaagaaacacaaagagaaggagaaggaacgggatccagaggatcggcac
cgcgagcacaagaaacaccgacacaaggatcgagacaaggagaaggatagagagcgagag
aagagaaagcgatcacgctccagagagagaagcagccgtggcacagagaaagagagccgc
ggtaaagccgagaagagcaatggagagccacgggtcaagaaggagaaagctgatgctgcc
tacgaggaaagcggtgatcctggtcctaaatccgcaagtggtgatgcttcacttagcatc
gaagagaccaataagctaagggccaagctaggtttgaaaccccttgatctcaatgaatcc
aagaaagaagcgggaactaaagaggaaccattggtggctgagaccattaaccctgttcag
atcagacagcaggctgagatgagagagaaaatggctgctctcaaagagaagcgtctgctc
aatcagaaactgggaaaagtgaagacacttggagatgatgaaccgtggctggatgacaca
gctgcatgggtagagaagagtcgcaaaatggccaaggagaaagagttggcagaaaagagg
gcaaagctcttagaggagatggatgaggagtttggtgtgagcaatctggttgagcaagag
tttgcgcaggaaaagcaggaatcatacagctcgcgtgatctcagagggctcaaagttcaa
cacaagatggattcttttaaagaaggggagttagtgatccttacgcttgaagacaaaggc
gttcttgaagagaaggaggacgtgctggtgaatgtgggccttgtggacaaagagaaagcg
gagaaaaatgtggaactcaagaagaaaaaacctgattataaaccttatgaagaagaggag
agcgtggatgacatggtcaatttcaaggaaaagtctgtgttgtccaagtatgatgaggag
atcgagggggagaagaaaaagagcttcaggctgagtgctggaggatttgtggggggtgag
agagagcgtgagctgcaggccatcagagagaatctgcgcagtcaggcacagtcgctggac
atgccttctctcaccctcgccaccgaatactacacaccacaagagatggtcggtttcaaa
aagaccaaatgcaaagtcaagaaaatcagaaagaaggagaaaccccgcagtgctgatgat
ttgttgttggacgacactcgcagcacagatttcggctccaggtctcgagggcggggcaga
agagaagcagatgaagaggggaagacgctggagaatgttgctatggaaaccactagcagg
gtgaatgatgtactgctgcggtcagacgacattagaatggctgacatggacattagtgaa
gatgaggactttgctcttcctgaacctgctgcgatagaggaagatgaagccgagcaggag
ctccagaagcagctggagaaacagaggaaactcagacagaaactgatgctcaaagactca
ggcgaacgggtggctgagcacatgaatagacttgcaacagatgcagatgatgacaacgac
ccagacaaaaagaacaatatcgtcttcaacgccacttctgagttttgccgcactcttggt
gatatccccacttacggactgtcgggcaaccgagaggaccaggaggacattatggacttt
gaaaaggaggaagagaaagagggagctggagattcagactctgatatggacgacaatgtg
ggttggagcacagtcaacctggacgaggagcagaaacacactgattttgcgacagcctct
acaactattcttgatgaagagcccatcgtgaagtctggtctcgctgcagctctgcttctg
tgcaagaacaagggcctgctagatacacagatgcagaagatggctcgtgtcaaagctctg
aaaccagctccaactgatgataactactgcattgaagacaagatgaatattgatgacaag
tacagcaggagagaggaatacagaggcttcactcaggatttcaaagaaaaggataattac
aagccagatgtcaagattgaatacgttgatgaatctggtcgcagactcacccctaaagag
gctttccgacagctgtctcatcgtttccatgggaaaggttctggcaagatgaaaaccgaa
cggaggatgaaaaaactggaggaagaagcgctgctgaagaagatgagtagcagtgacact
cctctgggcaccgttgctcttctacaggagaaacagaaatcccagaaaactccttatatt
gtgctgagcggcagtgggaagagcatgaatgcgaataccattacaaaataa
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