KEGG   Triplophysa rosa: 130570557
Entry
130570557         CDS       T09216                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
tros  Triplophysa rosa
Pathway
tros03030  DNA replication
tros03410  Base excision repair
tros03420  Nucleotide excision repair
tros03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130570557 (rfc2)
   03410 Base excision repair
    130570557 (rfc2)
   03420 Nucleotide excision repair
    130570557 (rfc2)
   03430 Mismatch repair
    130570557 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tros03032]
    130570557 (rfc2)
   03036 Chromosome and associated proteins [BR:tros03036]
    130570557 (rfc2)
   03400 DNA repair and recombination proteins [BR:tros03400]
    130570557 (rfc2)
DNA replication proteins [BR:tros03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130570557 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    130570557 (rfc2)
Chromosome and associated proteins [BR:tros03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130570557 (rfc2)
DNA repair and recombination proteins [BR:tros03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130570557 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    130570557 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA AAA_lid_RFC1 DNA_pol3_delta2 AAA_22 nSTAND_NTPase5 RCF1-5-like_lid AAA_14 AAA_16 Mg_chelatase Viral_helicase1 AAA_11 Rad17 RuvB_N AAA_assoc_2 MipZ AAA_19 nSTAND3 AAA_24 AAA_18 AAA_5 ABC_tran AAA_28 DNAX_ATPase_lid AAA_23 MeaB AAA_25 AAA_30 SLFN-g3_helicase RNA_helicase NTPase_1 eRF1_2 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 130570557
NCBI-ProteinID: XP_057216893
LinkDB
Position
LG19:11553697..11560186
AA seq 353 aa
MDVEMKETDSEQCQVDAPSKKDDNAPKSSTTAYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDEQIMMRLMEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKVIEQLWLLGYSPEDIIGNIFR
VCKTLQMPEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTATPDAS
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggatgttgagatgaaagagacagacagtgagcaatgtcaagtcgacgcgccgtctaaa
aaagacgataatgcacctaaatcatcgacgactgcttatgaactaccatgggttgaaaaa
tacagacctctaaagttgaatgaaattgtcgggaacgaggaaacggtcagcagactggag
gtgttcgcaagagaaggaaatgtgcccaacatcatcattgctggtccgcctggtactgga
aaaacgaccagcattttgtgtttggctagagctcttcttggtccagccatgaaagatgct
gtgcttgagctgaatgcctccaatgaccgaggaatagatgtcgtgagaaacaagatcaaa
atgttcgcccaacaaaaggtcacgttaccaaaaggtcgccacaagattatcattttggat
gaagctgacagtatgacagatggggctcagcaggctctgagaagaaccatggagatatat
tctaaaacgacacgctttgccctggcctgcaatgcatcagataagatcatcgagcccatt
cagtcccgctgtgcagtgctgcgttacagcaaactgagagacgagcagatcatgatgcgt
ctgatggaggtggtagaaaaggagaacttgcacgtcaccaatgatggcctggaagctatc
atcttcactgctcagggggacatgagacaggctctgaataacttgcagtcaacaaattct
ggatttggctacatcaacagtgaaaatgttttcaaggtgtgtgatgagcctcatcctctg
ctggttaagagtatgctggaacactgtgtcaatgctaacattgatgaagcctataaggta
attgaacagctttggttgctaggatactcaccagaggacataatcggaaacatctttaga
gtttgtaagaccttacagatgcccgaatatttaaagctggaatatataaaggagatcggg
tatactcatatgaaggtggcagaaggggtgaactctttattacagatggctggactgttg
ggtcgactgtgcagcaagactgcgacaccagatgcaagctaa

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