Triplophysa rosa: 130570574
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Entry
130570574 CDS
T09216
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130570574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130570574
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130570574
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130570574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_3
zf-ANAPC11
FANCL_C
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
130570574
NCBI-ProteinID:
XP_057216920
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All DBs
Position
LG2:complement(33376144..33460188)
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AA seq
842 aa
AA seq
DB search
MRVPVWRLAGLWPWLLMATLQVALGHTGLELAAAVESERSAPKAVIKVTLLKQEPTSTPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDERQESIFISIVKLESPESKVPQCQPLLD
KARLALQRGAQAVIFDITDDGSAAQELRDSGSLPRPVVLVKSTDAEELMRLVNKNEEAMV
QIDIMMETPKWPHYDVGILLTVALAVLAIIMIFALRFRCRSNRTWDSVHQQTMRAISRLE
TRTYTSPGCSGSQGSRGALGSNSSSGSSPVCAICLEEFMDGQDLRIISCAHEFHRECVDP
WLLQHRTCPLCMHNITGKQPQGPELTSRQSQRSRLPPPPPDHHSQAFLLPHHYSNPHPQH
HIPFSMRHHYPRTPSGPLPQFGHYGNSPPLHPRTLRCFPSTPLGASCVYHLGPDAHHGRP
HRTGGHGCRAVGHHYGPRRLCPRCPSGVLRNASGSRPSPVNHAAHHHVPRGGGSHGRQDD
GSCSGGSYRTERSGYLADVPVSDSSSGSCHGSSSDSVLNCTDISLQGVYGSWSTFRSSLS
SDYDPFVYCGPGRGSAEATERPRSLDSVMNRSGNGPGADGNGMCSEEQQQQQVAVFSHVH
YHRHRHHYYEDGEVSQGPGRGSDEEQGAAGGPCNAAKDKDSTGCQMQHLSCNCPKMDMGS
RGHEDTDPSGHSVVVPSSSLTSPSSSLTSPSPSCCHKGSAWPTRRKTTSCALEATAGPSP
VVHFHQNLDLQEDCSLHIHYGQGAGSYCCSPPPDVAPALLPVPLILDSTGMTDWPCCGGA
HVVWQKRIQQARSEPQLQSSASAVDRPLCRAHHRPGDELPRDICLYCQTLHNSQGSEEES
GV
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgtggcgattggccgggctctggccgtggctgctcatggccaccttg
caggtggcgttgggccacacgggtttggaactggctgctgccgtggagtccgaaagatcg
gcgcccaaagccgtgatcaaagtgaccctgttgaagcaggagcccaccagcacgcccatc
acactggagggggtgtttgccggaggcagtgccggctatgccgaggggaaactgatgcag
tctcacccgctgtctctgtgtaacaccagtgaggacgagcgacaggagagcatcttcatc
agcatcgtcaaactcgagagtccggagagcaaagtgccacagtgtcagccgctgctggac
aaagctcgattggctcttcagagaggggctcaggcggttatctttgatattacagatgat
ggcagtgctgctcaggaactgcgtgactctggttctctgccacggccggtcgtgttggtg
aagtccacagacgctgaagaactgatgagactggtcaataagaacgaggaagccatggtg
cagattgacatcatgatggaaactcctaaatggcctcactatgacgttggcattctcctg
accgtcgcgctggctgtgttggccatcatcatgatctttgcgctgcgattccgctgcaga
tccaacagaacctgggactccgtgcaccagcagaccatgagagccatcagcagattggag
acgcgcacgtacacgtctccaggctgcagcggatcccagggttcccgtggagctctgggg
tccaacagcagctccggatccagccccgtctgtgccatctgtctcgaggagttcatggat
ggccaggatttgaggatcatctcctgtgctcatgagtttcatagggagtgtgtggacccg
tggctcctgcagcaccgcacttgcccgttgtgcatgcacaacatcacgggtaaacagcct
cagggtccagagttgacatctcgtcagtcccagagatcccgcctgccgccccctccaccg
gaccaccacagccaggccttcctcctccctcatcactattcaaaccctcacccccagcac
cacatccccttctccatgcggcatcactacccccgcaccccctccgggcctttaccccag
tttggccactatggcaactctcccccactccatccccgcacactgcgatgttttcccagc
acaccgttgggcgctagttgcgtgtaccatctcggcccggatgcccatcacggacgcccg
cacagaacgggcgggcatgggtgtcgggccgtagggcatcactacggccccagacggctg
tgcccccgctgcccctcgggggtcctgcggaacgcttcgggctcccgtccgtcacccgtg
aaccacgcggcccaccatcacgtcccacgcggcggaggctcgcacggtcgccaggacgac
ggcagctgctcaggagggagctaccgcacggaacgcagcggttaccttgccgatgtgcca
gttagcgattccagttcgggatcgtgccacggctcgtccagtgactcggttctgaattgt
acggacatcagcctgcagggcgtgtacggcagctggtccacgtttcgcagttcgctcagt
agtgactatgacccgtttgtgtattgcgggccgggaagagggagcgcggaggccacggaa
aggcctcggtcgctggactcggtaatgaaccgctcgggaaacggacccggcgctgatggg
aacgggatgtgctcagaggagcagcaacagcagcaggtggctgttttcagtcacgtccac
tatcacagacacagacaccactattatgaggacggagaggtgagtcaagggccgggccgg
ggctcggatgaggaacagggggcggcgggtggcccttgtaatgcagctaaagacaaagac
tcgacagggtgtcagatgcagcatctgtcatgcaactgccccaaaatggacatgggttcg
aggggtcatgaggacacagacccctccggccactccgtggtcgtaccctcctcttcttta
acctctccgtcctcttctttaacctctccgtccccgtcttgttgccacaagggctcggcg
tggcccaccagacggaaaacaaccagctgtgcgttggaagcgactgccggaccttcgccg
gttgttcatttccatcaaaacttggaccttcaagaggattgtagccttcatattcactac
ggacagggagcgggaagctattgctgctcgcctccaccggacgtggcccccgcactgctg
ccggttcccctgattttggactctacggggatgacggactggccgtgttgtgggggggct
cacgtggtgtggcagaaacggattcagcaggcccgttcagagcctcagcttcaaagttct
gcctctgcggtggacagacccctgtgtagggctcatcacaggccaggggacgaacttcct
agagacatctgtctgtactgccaaactttacacaatagtcaggggtcagaggaagagtct
ggtgtatga
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