Triplophysa rosa: 130570603
Help
Entry
130570603 CDS
T09216
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
tros
Triplophysa rosa
Pathway
tros04145
Phagosome
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
tros04518
Integrin signaling
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130570603 (thbs4b)
04518 Integrin signaling
130570603 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130570603 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130570603 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130570603 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130570603 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130570603 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130570603 (thbs4b)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Phagocytosis
Opsonins
130570603 (thbs4b)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130570603 (thbs4b)
Exosomal proteins of colorectal cancer cells
130570603 (thbs4b)
Exosomal proteins of bladder cancer cells
130570603 (thbs4b)
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130570603 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
130570603
NCBI-ProteinID:
XP_057216949
LinkDB
All DBs
Position
LG19:complement(20109696..20118654)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKLNKASLRYLRRDGRMGTVTFNNLKLADGEKHRLLFHLKGLEVGGPKAFPQGQGVIPV
PGVELHVDCRLVETLRDLPAVFNGLNSHQGVELKTMQGKAQEELEELKLAFGDTMENVAS
LQDCHTHQSDSVQTLGLNTKQLTTQMLELTKVINELKDVLIQQVKETSFLRNTISECQAC
GLGGSEVVKPKCTPGVCFRVDMCIETEDGLECGPCPDGYTGDGYSCDDVDECQFNPCFPG
VRCVNMAPGFRCEACPLGFTGKPVEGVGVAFAQTHKQVCDDIDECKGPDNGGCTADSICV
NSVGSYQCGRCKTGFTGDQIRGCKPEKSCGNRLHNPCDPNAKCTEERDGTITCQCGIGWA
GNGFLCGKDTDIDGYPDEKLRCRDPTCRKDNCVTVPNSGQEDADSDGKGDACDPDADGDG
ILNEQDNCWLTPNIDQLNSDKDSHGDACDNCVRVDNPDQRDTDSDGLGDACDNDMDGDGI
RNVLDNCQRVKNRDQLDRDGDGVGDACDSCPDIPNPNQSDIDNDLVGDSCDTNQDSDGDG
HQDSKDNCPLVINSSQLDTDKDGLGDECDDDDDNDGIPDTIPPGPDNCRLVPNSDQIDDN
SDGVGDICESDFDQDKVIDRIDNCPENAEITLTDFRAYQTVVLDPEGDAQIDPNWVVLNQ
GMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQ
TEQTYWQATPFRAVAEPGIQLKAVKSKSGPGEHLRNSLWHTGDTNDQVRLLWKDPRNVGW
KDKVSYRWYLQHRPQVGYIRVRFYEGSDLVADSGVTIDTTMRGGRLGVFCFSQENIIWSN
LKYRCNDTIPEDFQEFSTQHGVDPL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactcaataaagctagcttacgatacctccgccgagatggcaggatgggtacc
gtcacctttaacaatctcaaactggccgacggggaaaagcatcgcttgcttttccatctg
aagggactggaagtaggcggtccgaaggcgtttccgcagggccagggggtgatacctgtg
cccggtgtggagctacacgtagactgcaggctggtggagaccctgagagatttacccgct
gtgttcaacggtctaaacagtcaccagggagttgaactcaaaacgatgcaggggaaagcg
caagaggagttggaggagctcaaactggcattcggtgatacgatggaaaatgttgcatca
cttcaggactgccacactcatcagagtgactccgtacagactttagggctaaacactaaa
cagctcactactcagatgctggagctgacgaaggtcattaatgagctaaaagatgttctc
attcagcaggtaaaggaaacatctttcctcagaaacaccatctctgagtgccaggcctgt
ggactgggcggatcggaggtggtaaagccaaagtgtactcctggagtgtgtttccgtgtc
gatatgtgcatagaaacagaggatgggctggagtgtggaccgtgccctgatggatacaca
ggggatggatacagctgtgatgatgttgatgagtgccagtttaacccgtgtttcccgggc
gtgaggtgtgtaaacatggctccagggttccgctgtgaagcctgcccacttggattcact
ggcaaaccggtggagggtgtgggcgtggccttcgcacaaacgcacaagcaggtgtgtgat
gatatcgacgagtgtaaaggtccagataatggaggctgcactgccgattccatctgtgtg
aactctgtgggatcatatcaatgtggcagatgtaagaccggtttcacaggtgaccagatc
cgaggttgtaagccagagaaaagctgtggaaaccggctgcacaacccctgcgaccccaac
gctaagtgcacagaggagagagacgggaccatcacttgtcagtgtggcattgggtgggct
ggaaatggttttctctgcggaaaagacacagacatcgatggctacccggacgagaagctt
cgctgcagagaccccacttgcagaaaggataactgtgtcaccgttccaaactcgggacaa
gaggacgcagacagcgatgggaaaggtgacgcatgtgacccagatgcagatggcgatgga
attctcaacgagcaggacaactgctggttgacgccgaatatagaccagctgaacagtgat
aaagacagtcacggcgacgcatgcgacaactgtgtccgagtggataacccagatcagaga
gacacagattcagatggcctcggagacgcatgtgacaatgacatggatggagacgggata
agaaacgttctggataactgccagcgggtgaaaaatcgtgatcagctggatcgtgatggg
gatggggtgggagatgcgtgtgacagctgtcctgatatcccaaatccaaaccagtctgat
attgacaatgatctcgttggagactcctgtgacacaaatcaagacagtgatggtgatggt
catcaagacagcaaggacaactgcccactggtaataaacagctcccagttagacacagat
aaagacggactgggagatgagtgtgatgacgatgatgataatgacggtattcccgacaca
attcctcccggacctgataactgtcggctggtgcccaattctgaccagatagatgacaac
agtgatggggtgggtgacatatgcgaatcagacttcgaccaggacaaagtgattgacagg
attgataactgcccggaaaacgcagagatcaccctgacagacttcagagcctatcagacc
gtcgtactggacccagaaggtgatgctcagattgaccccaactgggtggttctgaatcag
ggaatggagattgtccagaccatgaacagtgacccaggcctcgctgtcggctacactgcg
ttcagcggcgttgacttcgagggtacgttccacgtgaatacagtgactgatgacgactac
gccggctttatcttcggataccaggattcctctagtttttatgtcgtgatgtggaaacaa
actgagcagacgtattggcaggccacgcccttcagagccgtggccgaacctggcattcag
ctaaaggcagtgaaatctaaatctggaccaggtgagcatttgagaaactctctttggcac
accggtgacactaatgatcaggtgcgtctgctgtggaaggatccacggaatgtcggctgg
aaagataaagtgtcataccgctggtatctgcagcaccgcccacaggtcggatacatcagg
gtgcgattctatgagggctctgacctggtggcagactctggggtgacaattgataccaca
atgagaggtggaagactgggtgtcttctgcttctctcaggaaaacatcatctggtccaac
ctgaagtaccgctgcaatgacaccatcccagaggatttccaggagttcagcacacaacac
ggcgtggacccgctgtaa
DBGET
integrated database retrieval system
