Triplophysa rosa: 130570782
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Entry
130570782 CDS
T09216
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130570782 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130570782 (rbm22)
Spliceosome [BR:
tros03041
]
Complex B
Other components
Prp19-related factors
130570782 (rbm22)
Complex C
130570782 (rbm22)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
zf-CCCH_2
RRM_occluded
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
RRM_7
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
130570782
NCBI-ProteinID:
XP_057217218
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All DBs
Position
LG19:8715252..8718793
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AA seq
425 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMSKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEFGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKVPGHSDMLLKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRATTMPRLDIPDDKSITTLYIGGLG
EDVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRPSAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKEGQTESGIMLEPVPGLPGALPPPPLSDEDAPANYFNLGPSSSPAVMN
FQGLPPPPGVAMPPPPGFGPPMYHTMDPMAPPMPPPMAMRPPGQVHYPSQDPQRMGAHAS
RHGGP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctttgggttccaacacttacaacagacaaaattgggaagattcagatttt
cccatcctctgtcaaacatgcttgggtgaaaacccctacatccgcatgtccaaagagaaa
tatggcaaagagtgtaagatctgtgcacgtcccttcactgtgtttcgctggtgtcctggg
gtccggatgcgctttaaaaagacagaggtgtgtcagacgtgcagtaaaatgaagaatgtg
tgtcagacatgccttctggatctggaattcggtttgcctattcaggttcgagacacaggg
ctgtccgttaaagatgaagtaccgagatcagacgtgaataaagagtattatactcaaaac
atggagagagagatagctaactccgatggcacaagacctgtgggactgcttggtaaagta
cccggccacagtgatatgctgcttaaactggctcgtacttccccatactacaagaggaac
agaccacacatatgctccttctgggtgaagggagagtgcaagagaggagaagagtgtcct
tataggcacgagaagcccactgatccagacgatccacttgccgatcaaaacattaaggac
cgttactatggcatcaatgatcctgtggctgacaaacttctaaagcgggccaccaccatg
cccagactggatatacctgatgacaaatccatcactacactttatatcggaggcctggga
gaggacgtcacagactctgagctcagaaatcacttctaccaatttggggagattcgtacc
atcaccatcgttcaacggcagcagtgtgcattcatccagtttgccacgcgaccgtctgca
gagacggcagcagagaaatccttcaacaaacttatcatcaacggccggcgtcttaacgtt
aaatggggcaggtcacaagcagctcgagggaaggagaaagaagggcagacggagagtgga
atcatgctggagccagtgcctggactccctggtgctttgccccctcctcctttatctgat
gaggacgccccggccaactattttaacctgggaccctccagctctcctgctgtcatgaac
ttccagggacttcctcctccacctggtgttgccatgcctccacctcctggtttcggtcct
cctatgtaccacaccatggatcccatggccccaccaatgccccctcctatggccatgagg
ccccccggacaggtccactacccttcccaggatcctcagcggatgggcgcccatgcaagt
cgccacggaggcccatag
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