Triplophysa rosa: 130570863
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Entry
130570863 CDS
T09216
Symbol
hcfc1a
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1a
KO
K14966
host cell factor 1
Organism
tros
Triplophysa rosa
Pathway
tros03083
Polycomb repressive complex
tros04980
Cobalamin transport and metabolism
tros05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130570863 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
130570863 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130570863 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tros01009
]
130570863 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130570863 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
tros03029
]
130570863 (hcfc1a)
Protein phosphatases and associated proteins [BR:
tros01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130570863 (hcfc1a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130570863 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
130570863 (hcfc1a)
MLL-HCF complex
130570863 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130570863 (hcfc1a)
Mitochondrial biogenesis [BR:
tros03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130570863 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
130570863
NCBI-ProteinID:
XP_057217295
LinkDB
All DBs
Position
LG20:complement(13156655..13174655)
Genome browser
AA seq
1768 aa
AA seq
DB search
MTSPGSTVPGTTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLAFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGHSFSLVGSKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSNITGWDVPVTYGVLPPPRESHTAVIYTEKTTKKSRLVVYGGMSGCRLGDLWTLDIDT
MTWNKPGIGGAAPLPRSLHSATIITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSLSWETVLMDTLEDNIPRARAGHXAVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNAPSRVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPSATAATSPALSAAPSL
PGNSPKSPAPAAAAPSAQSLPQSGITLIPQAASPTASVTPGSPLAASTARGPAFLKVAAP
QSGTGTSIVTVRQATQAGKSPVTVTSLPAGVRMVVPTQTTQGTPIGSSPQMSGMAALAAA
AAATQKIPPSAGTTVLNVPAGATIVKTMALTPGSTTHPATVKVASPVMLSNPATRMLKTA
AAQVGSPTVSSPTTAARPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLSMGST
GTLFSNLGKVVSVVQTKPVQTGTMTGQATSNSLAQILQTKGPLPPGTILKLVTSADGKPT
TIITTPQSGGTGNKPTILGISGMSPSSTSKPGTTTIFKTIPMSALQHGAAGVTSSTGVKS
PITIFTTKMMTSGTPGKIITTVPKIGTATGQQGLTQVVLKGAPGQPGTILRTMPMGGVRL
VSPVSVGGVKPTVTTLVVKGTTGATTLGTVTGTVSTSLAGGSIASANATLATPITTLGTI
ATLSSQVINATAVSAAKSSLTTVSSTVQPTQVTLITTPSSVEAQPGQDLPVSILASPTSE
QPTSSESGAGDAAGTVTLVCSNPPCETHETGTTNTSTTATANMGTVPGGTVQRVCSNPPC
ETHETGTTNTATTASANMGNAQTATVQRVCSNPPCETHETGTTNTATTASSSMGGNRTGT
VQKVCSNPPCETHETGTTNTATTASSNMSGNQTGTVQRVCSNPPCETHETGTTNTATTAS
SSMGGNQTGTVQKVCSNPPCETHETGTTNTATTATCSMETDEGAAQQSSEASESTSSTEV
LPSSAAPQSRAITIVTQATPLPGPAVPSISSITESSEASAEPVVMESSEAESLQTEAEAV
ATQAEFQAEAVAMPSDFQGEAEALPSDFQGEAEAMQAESQAETGAVPMEHEATSMAEGEM
AAEQLPAAEMEGVEAASASQNAEALALPPELMSDEQSTTLMVTGLTPEELAVTAAAEAAA
QAAATEEAQALAIQAVLQAAQQAVMSSGEGGRDDQQTHTIPIILTQQELAALVHQQQQLQ
AAQQQAAAQAALPTEGLAPADSLNDPSSESNGHGEIAAASAEAGLLPRTTTETLAPSSTF
APAVVASPAKMQAAAALTEVANGIEALKQNPPTVTVKPPVKKENQWYDVGIVKVTNMVAT
HFYMPADDSAYVEDDSGTIPDYTQMKRVELQPGTAYKFRVAGINTCGRGTFSEISAFKTC
LPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYLAIQSSQTTEAKASTPAQLA
FMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDG
ISAKPAPKRAVSSPDAKGIGLKKARMDQ
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgacatccccaggttccactgtgcctggaaccaccggcgctcctctgcagccccgatgg
aagcgggttctggggtggtccgggccggtcccccggccaagacacggacacagagctgtg
gccatcaaggagctgatggttgttttcggcggaggaaacgaaggaatcgtcgacgagttg
catgtttataatactgcaacgaaccagtggtttataccggctgttcgtggagacattcct
ccaggctgtgcggcatatggttttgtatgtgatggcacacggctgttggcgttcggtgga
atggtggaatatggaaaatacagtaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaggccccaaaaaatggggctccgccatgtccgcgtctgggc
cacagtttttctcttgttggcagcaagtgctatctctttggggggcttgccaacgacagc
gaagaccccaagaataacattcccagatatttgaatgacctttatactcttgagcttcgt
ccgggctccaacatcacgggttgggatgtaccagtcacgtatggagttctgcctcctcca
cgagagagtcacactgctgttatttatactgaaaaaactactaagaagtcccgtctcgtc
gtatacggaggaatgagcggctgtcgtttgggagatctttggacattagacattgataca
atgacctggaacaaacccgggataggcggcgctgcaccactcccccggagtcttcactcg
gccaccatcatcacaaacaaaatgtatgtttttggaggctgggttcccctggtgatggat
gatgtaaaagtggccacacatgagaaggaatggaagtgcacaaacacattggcctgtctg
aacttggactcgttgtcctgggagaccgttttgatggacactttggaggacaacataccc
cgggcacgagcgggacattgagcagtcgctattaacaacaggctttacgtgtggagtgga
cgtgatgggtatcgtaaagcgtggaacaatcaggtgtgctgcaaagacctgtggtacctg
gagacagaacgacctaatgctccttcaagggtacagcttgtccgagccaacacaaattct
ttagaggttagctggggagctgtgtctacagcagatacgtacctgcttcagcttcagaaa
tacgatatcccgtcagccactgctgccacctcaccagctctcagcgcagctccctctctc
cctggaaactcgccaaagagtccagcgcccgcagcagctgctccatctgcgcagagtctg
ccccagagtggcatcactctcatcccacaggctgcatcccccacagcctcagtcacacca
ggaagtcctctggcggcctccacagctcgtggcccagcttttctaaaagttgcagcccct
cagtcgggcactggcacatcgatcgtcaccgtgcgacaagccacccaagctggaaaatcc
ccagtcactgtgacatcacttcctgcaggtgttcgtatggtcgtgccaacacaaacaact
caaggaacgcccataggcagcagccctcagatgagcggaatggcagctttggcagcagct
gctgctgctacacagaaaattcccccctctgctggaaccactgttcttaatgtaccggct
ggggccacaatagtcaaaacaatggctctgacacctggatccaccactcatcccgccacg
gttaaagtggcgtctcctgtcatgctaagcaatcctgccacacgcatgctgaagacagcc
gctgctcaggtgggcagtccaacagtgtcgagtcccactacagccgctcgacccatcatc
acggtgcacaagtcaggcactgttaccgtagctcagcaggcccaagttgtgaccactgtg
gtgggcggagtcaccaagaccattactcttgtcaagagcccactttctatgggaagcact
ggcaccctgttctctaatttgggcaaagtggtgtcagtagttcagaccaaaccagttcag
acgggcaccatgactggacaggccacttccaattcactggcacagattttacagacaaag
ggtccccttcctcccggcaccattctgaagctggtaacatctgctgatggaaaaccaacc
accataattaccacccctcaatcagggggcacaggaaacaagcccaccatcctgggcatc
agtggcatgtctcccagttccaccagcaagccgggcactaccactatctttaaaacaatc
cccatgtctgctttacaacatggagctgcaggtgtgactagtagtacaggggtgaagagc
cctatcaccatcttcactactaagatgatgacatctggaactccaggcaaaatcattaca
acagtgcccaagattggcacagcaacaggccagcaaggactaacacaggttgttttgaag
ggtgctccaggtcaacccggaaccattcttcgcaccatgccaatgggaggagtgcgtctt
gtgtctccagtatcagtgggtggggtcaagccaactgtaaccacactggttgtgaaggga
acgactggtgcaacaactcttggcaccgtcacaggtacagtttctaccagtttagcagga
ggaagcatagccagtgccaatgccaccctggcaacccctattaccactttgggcaccatt
gccaccctctccagccaggtcattaatgctaccgctgtgtctgcggctaaaagcagcctg
actactgtctcatctacagtgcagcccacccaggtcaccctcataactacacccagtagt
gtggaggctcagcctggccaagacctgcccgtttccatcctggcctctcctacctctgag
cagcccacctccagtgagtctggagcaggtgatgccgctggtactgttacgctagtgtgc
tccaaccccccatgcgagactcacgagaccggcaccaccaacacatccaccactgcaacg
gcaaatatgggcactgtgccaggcggcacggtccagagggtgtgctcgaacccaccctgc
gaaacacacgaaacgggtacaacaaacacagccaccacagcatctgccaatatgggcaat
gcccagacagccactgttcagagggtctgctccaacccaccctgtgagacgcacgagacg
ggcaccaccaatactgcaaccacagcttcatctagcatgggtggaaaccgaacaggaacg
gttcagaaggtctgctccaacccaccctgtgagacgcacgagacgggcaccaccaacacg
gccaccacagcttcatctaatatgagtggaaaccaaacaggaacagtccagagggtctgc
tccaacccaccctgtgagacgcacgagacaggcaccaccaacactgcaaccacagcatca
tctagcatgggtggaaaccaaacaggaacggtccagaaggtctgctccaacccaccctgt
gagacgcacgagactggcaccaccaacacggccaccaccgccacctgcagtatggagacc
gatgagggagcagcccaacagagtagtgaagcatcagagtccaccagcagcacagaagtc
cttccttcatctgcggcacctcagagccgagccatcaccatagtcacacaagcaacacct
ctaccaggaccagctgttccatctatctcttcaatcacagagtcctcggaggcaagcgcc
gagcctgttgttatggaaagctctgaggcggagtccttgcaaactgaagcagaggcggtc
gccacgcaggccgagttccaggcggaggcggtggccatgccaagcgacttccagggagaa
gctgaggctttgccaagtgacttccagggagaagcagaggccatgcaggcggagagccaa
gcggagacaggcgcggtgcccatggaacatgaggccactagtatggcagagggagaaatg
gctgcagaacagctaccagcagcagagatggagggtgtagaggcggcatcagcgtcccag
aatgccgaggctctggccctgccccctgagctaatgtcggacgagcagtccacaacgctg
atggtgaccggtttgacaccggaggagctggccgtcacggcggccgcagaggcagcggcc
caggctgcagctacagaggaggcccaggcccttgccatccaggcagtgttacaagcagca
cagcaggctgttatgagttctggtgaaggaggaagagatgaccagcagacccacaccata
cccatcattctgactcagcaggaactggccgccctggttcatcagcagcaacagcttcag
gcagcccagcaacaggccgccgcccaggcagctctgcccacggagggcttggctccggcc
gacagcctaaatgatccatcttcagagagcaatggacatggcgagatagcagcagcaagt
gcagaggccggactgctgccacgcaccaccacagaaacattggctccatccagcactttt
gcacctgctgtagtcgccagtccagccaagatgcaagcagcggcagctctgactgaagtg
gccaatggaattgaggctctgaaacaaaatcctcccactgttaccgtcaaaccacctgtt
aagaaagaaaaccagtggtatgacgttggcatagtcaaagtgaccaacatggttgcaacg
catttctacatgcccgcagatgactccgcttatgttgaggatgattctggcacaattcct
gactacactcagatgaagagggtggagcttcaacccgggactgcctacaagttccgtgtg
gcgggtataaacacgtgtggtcgtggcaccttttctgaaatatctgctttcaagacctgc
ttaccaggattcccaggggcaccatgtgctataaagataagcaagagtccagatggtgca
caccttacatgggagcctccatccgtgacgtcaggaaagatcacagagtactctgtgtat
ttggccatccagagtagccagaccaccgaggccaaagcctctaccccagcccagctggct
ttcatgcgtgtttactgtgggcctaacccctcctgcctggtccagtcctccagcctgtcc
aacgcccacatagactacaccacaaaacctgccatcatcttccgcatcgcagcacgcaat
gagaaaggttacggcccagctacccaagtgcgatggcttcaagagtcgagcaaagatggc
atctctgcaaagcctgccccgaaaagagcagtttcttcaccagatgcgaaagggattggt
ctgaaaaaagcaagaatggaccagtga
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