Triplophysa rosa: 130570916
Help
Entry
130570916 CDS
T09216
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
tros
Triplophysa rosa
Pathway
tros04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130570916 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130570916 (nfasca)
Cell adhesion molecules [BR:
tros04515
]
Immunoglobulin superfamily
L1 family
130570916 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_5
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_6
BiPBP_C
DUF3792
Syndecan
Motif
Other DBs
NCBI-GeneID:
130570916
NCBI-ProteinID:
XP_057217410
LinkDB
All DBs
Position
LG20:12386941..12453040
Genome browser
AA seq
1388 aa
AA seq
DB search
MRTQGRWAALAVLSIILLLSKEAVPIEVPLDPKIQQEMKQPPTIVKQSLKNYIVDPRDNI
IIECEAKGNPVPTFQWRRNGKFFNVGKDPRVTMRKRSGTLEIGSSGKPEDYEGEYQCFAS
NDFGTAISNKILLRVSKSPLWPKEVLEPVVVREGASLVLPCNPPPGLPPPETFWMDSSIM
PISQDKRVSMGLNGDLFFSNVLAKDAITDYSCNARFDFTHTIQQKNPYNLKVQTNEPYND
TLVNSTDVYGARNVAETHPNFLSPKGLSSSKMVLRGEQLLLECIAAGVPTPTINWFKRGG
DLPLQKVKFGNFNKTLHILNVSEEDSGSYICMASNKMGSIRHSVDVQVKSAPYWLDKPTN
LVLAPDENGRLVCRANGNPKPTIQWQMNGGPIDSSLPNQQVLGDTIMFHSVQIGGSAVYQ
CNASNEHGYLLANAFVNILDMVPRMLGPKNQLIKVIENNRTFLDCPYFGSPFPVLRWFKN
GHGSGLDGGQYKVYHNGTLEIKQARPEDQGTYTCVASNILGKSENKVILEVKEPTRIVRA
PEHVTGPRGSTARFDCRVKHDPSLPITITWLKDDKPLSFGWLGRLRKDDESMTIHNINPE
DSGTYTCTAKTEIDEDSASARLTVIMDDNSSASNRSASAGRPDPPQDLELSDPSARIVRL
TWVPGNENNSPVTHFLVQFEEDRWEPGKWQNLSIHDGNLNSVNLQLSPFVNYQFRVIAIN
AVGQSQPSHPSARYQTSGAPPDVVPSGLKGWGSKKNNMEITWQPLLNTERNGPNMRYVLW
WRLENTDEEWNNINTTKTKHTIHNIDTYVPYEIKIQAANDFGLSPVSNVVIGYSGEDKPS
AAPTNLRVSKINSTKVNVHWTPVDLSNVNGEFKEYKLYYWREASLIKGLKVNRTKLHKGF
YTTAEHPSGILTELYPYSKYKMYMVVANREFEGPQSNSVEFETKEGEPGAPKYFKIQKHT
DVVHLKWDKPLEPNGVLIGYTIQYHTVNGTQEGERKVQSFPPNVTEYIMNLPHRFTRYKF
YLAARTQVGAGEVYAVESPHFTNEGTPDTDSTVVAVNFTDALMFETPPPPLSTVPVPEIL
TPEPATPAPTTAAPPKPTTTTTTTTTTTTTTTTTAASTTVAPVRPVSPKTVDWKLLAPNV
KIWNVTVDVNSDHANVSWKHNFSVDSSVFVIEYTPENKSQTHLPRAGNGIMKSFQVNRGP
PIKLSGLLDGVKYRLRVYSHEHHSISSDYVTFETAYKESEDIATQGWFIGLMCAVALLVL
ILLIVCFIKRSRGGKYKVSEKKDLPLDAVDHKDQDGSFDYQNENRSVDRERESSDEDNKP
LQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKEETEGNESSEATSP
VNAIYSLA
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgcaggggcggtgggcggcactggcagtgttgtcaataatcttgctgctgtca
aaggaggcggttccaattgaagtcccactagacccaaagatccaacaagagatgaaacaa
ccccccaccattgtgaagcaatcactaaagaactacattgtggaccccagagataacatc
atcattgaatgcgaggccaaggggaacccggtgccaacgtttcagtggaggcgaaatggc
aagttcttcaacgtggggaaggacccgcgggttaccatgcggaaacggtcgggaacgctg
gagatcggaagcagcgggaaaccggaagattacgagggagagtaccagtgtttcgcttcc
aacgactttggcacggcaatttccaacaaaatcctgctacgagtgtcaaagtctcctctg
tggccaaaggaagttctggagccagtggttgtgcgtgaaggggcgtcactcgtcctcccc
tgcaacccacctcctggactcccccctcctgaaaccttctggatggacagttccattatg
cctatatcgcaggacaagcgagtatcaatgggtttgaatggtgacctgttcttctccaat
gttttggctaaagatgccatcactgattacagctgtaacgctcgcttcgatttcacacac
accattcaacagaagaacccgtacaacctcaaagtccaaaccaatgagccttataatgac
accttagtcaactccactgatgtgtacggtgcacgtaatgtggcagaaacccatcccaac
tttctgtctccaaagggcttgtccagctctaaaatggtgctgcggggggaacagcttctg
ctggagtgtatagctgctggagtcccaactcctaccatcaactggttcaaaagaggagga
gatcttcccttacaaaaggtcaagtttgggaactttaataaaacgttacatatcctcaac
gtgtctgaggaagactctggaagctacatctgcatggccagcaacaagatgggcagcatt
cgacattccgttgacgtccaggtcaaatccgctccctattggctggataagcccaccaat
cttgtgcttgcccctgatgagaatggacgattggtgtgtcgtgcaaatgggaacccaaag
cccactatccaatggcaaatgaatgggggacctatagatagttcactgcctaaccagcaa
gtgctgggtgataccatcatgttccattcggtgcagatcggtggcagtgcggtgtaccaa
tgcaatgcttctaatgagcatggatacctactggccaacgctttcgtcaacatcttggac
atggttccacggatgctaggcccgaagaaccaactgataaaagtcattgagaacaacagg
actttccttgactgcccttactttggctcaccgttccctgtgctgcgctggttcaagaat
ggccatggtagtggtcttgatggtggtcagtataaggtgtatcacaatggtacattggag
atcaaacaggcgcgacctgaagatcagggcacgtacacctgcgtcgccagtaacattctg
ggcaagagtgagaataaggtgatcctggaggtcaaagagcccacaagaatagtacgggcc
ccagagcacgtgacaggacccagaggaagcacagctcgctttgactgtcgagttaaacac
gatccgtcccttcccattaccatcacatggctaaaagatgacaagcctttgagcttcggc
tggctgggccggttaagaaaggatgatgaatccatgaccattcacaatatcaatccagag
gattcagggacgtacacatgcactgccaaaactgagatagatgaagactctgcctctgct
cgccttacagttataatggatgacaactcgtctgcctcaaatcgtagtgcctctgcaggt
cgacccgacccccctcaggatcttgaactgtcggatccttcagctcgcattgtcagactc
acctgggtgcctggaaatgaaaacaacagccctgttacacatttcctcgtccagtttgaa
gaggacagatgggagccggggaagtggcagaacctgtcaatacatgatggcaacctgaac
tcagttaacctgcagctgtcaccctttgtcaactaccagttcagagtcatagccatcaat
gcagtgggtcagagtcaacccagccacccctctgcacgctatcagaccagcggcgctcct
cctgatgtggttccaagtggtctaaaaggatggggaagcaagaagaacaacatggagatc
acttggcagcccctgctgaacacagagagaaacggtccgaacatgcgatatgttctctgg
tggagattggaaaacacagatgaagaatggaacaacattaacaccactaaaacaaagcac
actatccataatatagacacctacgttccatatgaaatcaaaatacaagccgccaatgac
ttcgggcttagtccggtgtctaatgttgtcattggttattctggggaagacaaaccatca
gctgcacctacaaacctcagggtgtcaaagatcaacagcaccaaagtaaatgttcactgg
acccccgtggacctcagcaatgtgaacggcgagtttaaggaatacaagttgtactactgg
agggaggccagtctgattaagggcctgaaagtgaacaggacaaagctgcacaaagggttc
tacacaacggccgaacatccctctggcatcctcactgaactctatccttacagcaaatac
aagatgtacatggtcgtggctaacagagagtttgagggtccacagagcaactctgtggag
tttgaaacaaaggagggagagccgggcgccccaaagtatttcaagattcagaagcacaca
gatgtggttcacctgaagtgggataagcccctggagccaaatggtgttctgattggatac
acgattcagtatcacacagtaaatgggacacaagagggagagaggaaggtccagagtttc
cctcccaacgttacggagtacatcatgaacctgcctcaccgtttcacaagatacaagttc
tacctagcggctcgtacacaggtcggcgctggagaggtgtacgccgtagagtcgccacat
ttcacaaatgaaggcaccccagatactgactctacagttgtagcggttaactttacagat
gccttgatgttcgaaacccctccccctcccctatccactgtcccagtcccagaaatactt
accccagaaccagccacacctgcccctacaactgctgctccacctaaacctacaacaact
accaccactactaccacaactacaacaaccacaactacaactgcagcttccactacagtt
gctccagttcggccggtttctcctaaaactgtggactggaaactgctggccccgaatgta
aagatctggaatgtgaccgtggatgttaacagtgaccatgctaatgtcagctggaagcac
aacttctccgttgacagcagcgtgtttgtgatagagtacacgccggagaataagagccag
acgcatctaccgagagctggtaatggtataatgaaaagctttcaagtaaaccgcgggcct
cccattaagctgtccgggctgttggacggggtcaagtatcggttgcgggtgtattcccac
gagcaccactccatcagcagtgactatgtcacgttcgagacagcctacaaggagtctgaa
gacatcgctactcagggctggtttattgggctcatgtgtgccgtcgctctgttggttctc
atcttgctcattgtctgtttcatcaagaggagtcgtggaggaaaatacaaagtgagcgaa
aagaaagacctcccattagatgctgttgaccataaagaccaagatggatcatttgactat
cagaacgagaacaggtctgttgacagggagagggaaagcagtgatgaggacaacaagcct
ctgcagggcagccagacctctctggatgggaacgtgaaggagagcgatgatagtctggtc
gattatggtgaagggggtgacggtcagttcaatgaggacggctccttcattggccaatac
acagttaagaaggacaaagaggaaacggagggaaacgaaagctcagaggccacgtcacct
gttaatgccatctactctctggcgtag
DBGET
integrated database retrieval system
