KEGG   Triplophysa rosa: 130570942
Entry
130570942         CDS       T09216                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
tros  Triplophysa rosa
Pathway
tros03082  ATP-dependent chromatin remodeling
tros03083  Polycomb repressive complex
tros04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130570942 (rbb4l)
   03083 Polycomb repressive complex
    130570942 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    130570942 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tros03036]
    130570942 (rbb4l)
Chromosome and associated proteins [BR:tros03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     130570942 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     130570942 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     130570942 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     130570942 (rbb4l)
    PRC2.2
     130570942 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     130570942 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    130570942 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    130570942 (rbb4l)
   NuRF complex
    130570942 (rbb4l)
   NuRF complex (fruit fly)
    130570942 (rbb4l)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 Beta-prop_EML_2 EIF3I WD40_WDHD1_1st Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD_LRWD1 eIF2A Beta-prop_WDR19_1st Beta-prop_RIG_1st WD40_MABP1-WDR62_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 130570942
NCBI-ProteinID: XP_057217468
LinkDB
Position
LG20:complement(7990768..7995223)
AA seq 425 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDY
AVHRLALGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGY
GLSWNSNLSGNLLSASDDHTICLWDISAFPKEGKIVDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESQKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASEL
EGQAS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcagacaaagaagtatatgatgatgcggtggaggagagagtaataaatgaagaatat
aagatctggaagaaaaacacaccattcctgtatgatctggtcatgactcatgcccttgag
tggccaagtttgaccgtgcagtggcttcctgacgtgaccagacctgaggggaaggattat
gcagtccatcggctggcgttgggcacacacacatcggatgagcagaaccacctggtcatc
gcaagcgttcagatccctaatgatgatgcccagtttgacgcgtcccactatgacagtgag
aaaggagagtttggaggttttgggtcagtgagcggaaagattgaaattgagattaagatc
aatcacgaaggagaagtgaaccgagccagatacatgccgcaaaacccctgcatcatcgcc
accaagacccccacctctgacgtgctggtgtttgactacaccaaacacccatccaaacca
gaccccagtggagaatgtagtccagatttgaggctgagggggcatcagaaggagggctac
ggcttgtcctggaactcgaacttgagtggaaacttgctcagtgcatcagacgaccataca
atctgtctatgggacatcagtgcttttccaaaggaggggaagatagtagacgccaagacc
atcttcacaggacatacagctgtggtggaggatgtgtcctggcatcttttacatgaatca
ctcttcggctctgtggctgatgatcagaaacttatgatctgggacacacggtcaaacaac
acatcaaagcccagtcacgctgtggacgcccatacggctgaagtcaactgtctgtccttc
aatccctacagtgagtttattctcgccaccggctcggcagacaagactgttgcattgtgg
gatctgcgcaacctgaagctgaagcttcattcatttgaatcccaaaaggatgaaatcttc
caggtccagtggtctcctcataatgaaaccatcctggcctccagtggcacagacagacgt
ctcaatgtctgggacctgagtaaaattggagaggagcaatctgcggaggatgcagaagac
ggtcctccagagctgctgttcattcacggtgggcacacagcaaagatctcagatttctcc
tggaaccccaatgaaccctgggtaatttgttcagtgtcagaggacaacattatgcaagta
tggcagatggctgagaacatctataatgatgaagagccagacacccccgcatcagagctg
gagggacaggcgtcgtaa

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