Triplophysa rosa: 130570950
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Entry
130570950 CDS
T09216
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tros
Triplophysa rosa
Pathway
tros04517
IgSF CAM signaling
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130570950 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130570950 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130570950 (sptbn1)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130570950 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
130570950 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
SOS1_NGEF_PH
PMC2NT
PH_13
Motif
Other DBs
NCBI-GeneID:
130570950
NCBI-ProteinID:
XP_057217476
LinkDB
All DBs
Position
LG20:20078421..20149747
Genome browser
AA seq
2348 aa
AA seq
DB search
MTTVAAEYEHMDIQQTYQESVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYTNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVLAV
VAVAKELEAENYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNTNAQKFAVDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAAERHARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEAKIRERIAD
VQAQWAALEQLAAVRKARLEEACSLHQFQVDADDVDAWTLDALRIVSSADVGHDEFSTQA
MVKKHKDASAEVASYRQVIDALHEQAQALRPEQAQAGNVSERLSGIEERYKEVSELTRLR
KQALQDALARYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLMHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEADR
LGDEHPDQAKAITGRLAEINSVWEEMKETLHNREASLGEASKLQQFLRELDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYALAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLTSDGNINAERIQERAASIDDRHKKNR
EAAVELLMRLKDNRDLQKLLQDCQELTLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKDGKQLVSEKPDTEAVVKEKLSGLQKMWTELESTTQTKAQCLFDANK
AELFTQSCADLDKWLHGLEGQIQSDDYGKDLTSVSILLKKQQILENQVEVRQREVDELQS
QAHVLRQEGKDTDEVDGRREVVEQKFQELLEPLIKRKKFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQRRCDDIFERSQGILKADSPNVEA
IRARLADLQQLWSLIMQETEKRHSRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADDLINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQDDAVRLQSAYAGDKADDIQRREGEVLEAWRCLLEACEGRRARLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
RELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRLQEEEERRRKPPT
PEPAQDTDAQQRDGEQIAQNGLPSDQDSPRDGVEGEMNGVPEKSSKEGSPVPSPTAERRA
KGSQSSTLPAKGQDSPTAQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNHEMGFYKDN
KTAGQGIPYHNEIPISLKEAVCEVAVDYKKKKHVFKLRLTDGNEYLFQAKDDEEMNTWIQ
AIQNAGSASSSSEKTEITPSNQSTPASSRAHTLPATVTLMTESSPGKREKDKEKDKEKRF
SLFSKKKQ
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaatacgaacacatggacatccagcagacgtaccaggagagt
gtcaacaaccgctgggatgacgactgggacaatgagaacagctcggcccgattattcgag
cgctctcgcatcaaagctctggcagatgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactctcacctgtcgcgcgtgtcctgccggatcacggatctgtacatggac
ctgcgagatggacggatgctcatcaagctgctggaggttctgtcaggagagagactgccg
aagccaacgaagggtcgtatgcgaatccactgcctggagaacgttgacaaggccttgcag
tttctgaaagaacagcgggttcacctggagaacatgggctctcatgatatcgtcgacggc
aatcacagactcacgctcggtcttatctggaccatcatcctccgtttccagatccaggac
atcagtgtggagacagaagacaataaagagaagcgttcagctaaggatgctctgctgctg
tggtgtcagatgaagaccgcaggctataccaacgtcaacatccacaacttcagcaccagc
tggagagacggcatggctttcaatgccctcattcacaaacacagaccggacctgatcgat
tttgacaaactgaagaagtccaatgctcactacaacctgcagaacgctttcaacctggcc
gaacagcatctgggtctcaccaaactgctggatccagaagatatcagcgttgaccatccc
gatgagaaatcaatcatcacttacgtcgtcacatactaccattatttctccaagatgaag
gctttgaaggtggagggcaagcgtatcggaaaggtgctcgataacgccattgagacggaa
aagatgatcgagaaatatgaatctctggcgtcggatcttctggagtggattgagcagacc
atcatcatcctcaacaatcgcaagtttgcaaactctctggtgggagtccagcagcagctt
caggcctttaacacataccgcacggtggagaaaccgcccaaattcactgagaaagggaac
ctggaggttcttctgttcaccatccagagcaaaatgagagccaacaatcagaaggtgtac
atgcccagagagggcaaactcatatctgacatcaacaaggcgtgggagcgtctcgagaag
gccgagcacgagcgagagctggcgctgaggaccgagctcattcggcaggagaagttggaa
cagctcgctcgacgcttcgatcgcaaggccgccatgagagagacctggctgagcgagaac
caacgcctcgtctcccaggacaactttggattcgacctccaggccgttgaggcagctacc
aaaaaacatgaagccattgagacagacattgcggcatacgaggagcgcgtgctggcggtg
gtcgccgtggcgaaggagctggaggcggagaactatcacgacatcaagcgcatcgccgct
cgtaaagataacgtcctgcgtctgtgggagtatctgctagaactcctgaaggctcgcaga
cagcggctggagatgaacctcggcctccagcgtgtcttccaggagatgctctacatcatg
gactggatggatgagatgaagatgttgcttctctctcaggattatgggaaacaccttctg
ggtgttgaagatctgctacagaaacatgctttggtggaggccgacatcgccatacaggcc
gaccgcgtgcgagcagtcaacaccaacgctcagaagtttgctgtggatgaggaaggctac
aagccctgtgaccctcaggtcattcgtgaccgtgtggctcacatggagttctgctaccag
gagctgacccaactggcggccgagcgtcacgctcgcctggaggaatcccgtcgcctctgg
aagttcttctgggagatggccgaggaagagggctggatccgtgagaaagagcagatcctg
tcctcggacgactgcggtaaggatctgacgggtgccgtgcgtctgttgagtcaacaccgt
gccctcgaggacgaaatgagcggtcgggccggtcacctccagcacacggtgcgtgaaggt
caagccatggccgacgcgggccacttcggcgaggccaagatccgtgagcgcatcgctgac
gtgcaggcgcagtgggccgctctggaacagctggccgccgtgaggaaagctcgtctggag
gaggcttgtagtcttcaccagttccaggtcgacgccgatgacgtggacgcctggaccctg
gacgccctccgaatcgtctccagtgccgacgtggggcacgatgaattctccactcaagct
atggtgaagaaacacaaggacgcgtccgccgaggtcgctagttaccggcaggtgatcgac
gcacttcacgaacaggcccaagcactgcgacctgaacaggcgcaggccggcaacgtcagc
gagcgactgtcgggtatcgaggagcgttataaggaggtgtccgagctgacccgactgagg
aaacaagccctgcaggacgccctggcacggtataagatgttcagcgaggcggacgcgtgt
gaactctggatcgatgagaaggaacagtggctgaacagcatggagatcccagagaaactt
gaggaccttgaggtcattcagcacaggtttgagagtttggagccggaaatgaataaccag
gcatcacgtgtggccgtggtgaatcagatcgcccgacaactgatgcacagcggacacccc
agtgagaaagacatcaaagcccaacaagacaaactcaacaccagatggagtcagttccgt
gatctggtggaccagaagaaagaatccctgaactccgctttgggcgttcagaactaccac
ctcgactgcaatgagaccaaatcctggatccgcgagaagacgaaagttatcgagtccacc
caggagctgggcaacgacctgacgggcgtgatggccctccagcgcaaactcacgggcatg
gagcgtgacctggccgccatcgaagccaaactgggcgatctccgcggcgaggccgaccgt
ctgggcgacgaacatccagaccaggccaaagccatcacgggccgtctggccgaaatcaac
tcggtttgggaggagatgaaggaaaccctgcacaaccgtgaggcgtccctcggggaagcc
agcaagctgcagcagttcctcagggaactggacgatttccagtcctggctgtcccgaacg
cagacggccatcgcctctgaggacatgcccaacacgcttgctgaggccgagaagctgctg
gcccagcacgagggcatcaagaacgagatcaataactatgaagaggactatcagaagatg
agagacatgggtgagatggtgacccagggtcagacggacgctcagtacatgttcctgaga
cagaggcttcaggctttggatacgggctggaatgagctgcataagatgtgggagaaccgt
cagaacctcctgtcgcagtctcatgcctatcagatcttcttgagagacaccaaacaggcc
gaggctttcctcaacaaccaggagtatgctctggcccacactgagatgcccaccacactg
gaaggggctgaagctgctattaagaaacaagaagacttcatgaccaccatggacgccaac
gaggacaagatcaatagtgttgtagaggctggacggagactgaccagtgatggaaacatc
aacgctgaacgcatccaagagagagcggcatcaatcgatgatcgacacaagaagaatcgt
gaggcggctgtggagctgctcatgagactgaaggacaacagagatctgcagaagttgctg
caggactgtcaggagctcaccctgtggatcaatgagaagatgttgacggcacaggacatg
tcgtacgatgaagctcgtaacctgcacagcaaatggctgaaacatcaagcgttcatggca
gaacttcagtccaacaaagagtggctggataaaatcgagaaggacggaaagcagctggtg
tcagagaagcccgacaccgaagccgtagtgaaggagaagttatcgggactgcagaagatg
tggactgagctggaatccaccacacagactaaagctcagtgtctgtttgatgccaacaaa
gccgagctgttcacgcagagctgcgcagatctggacaaatggctgcatggcctggaggga
caaatccaatctgacgactacggcaaagatctgaccagcgtcagcatcctactgaagaaa
caacagatattggagaatcaggtggaggtgcgtcagagggaggtggatgagcttcagtct
caagctcacgtgctccggcaggagggaaaagacacggatgaggtggacggacgccgggaa
gtggtggagcagaagttccaggagctgttggagccgctgataaagaggaagaagttcctc
atggcctctcgtgagatccatcagttcaaccgtgacgtcgaggacgagatcctctgggtt
gaggagaggatgccactggctacatcaaccgaccatggcaacaacttacagactgttcag
ctgcttatcaagaagaaccagacacttcagaaggagatccagggtcaccagcggcgctgt
gatgacatcttcgagcgcagccagggcatcctgaaagccgacagtccgaacgtggaggcg
atccgagcgcgtctggccgatctgcagcagctctggagtctgatcatgcaggagacggag
aagcggcacagccgtctggaggaggcacacaaagcccagcagtattactttgacgcggct
gaagccgaagcttggatgagcgaacaggaactttacatgatgtctgaggagaaggccaag
gatgagcagagttcagtggccatgttgaagaaacatcagatcttggagcaggcggtggag
gattacgcagagactgtacatcagctgtccaagaccagccgaggactggtggccgccaac
catcccgagagcgagaggatcggcatgcgtcagtcgcaggtggataagctgtacgccgga
ctgaaggacctgtcagaggagaggagaggtaaactggaggagagattccgtctcttccag
ctgaaccgggaggtggatgacctggagcagtggatagccgagagagaagtcgtggccgga
tctcacgaactgggccaagattacgaacatgttactatgttgcaggaacgtttccgtgaa
tttgcccgagacactggaaacatcggccaggagcgtgtggacggtgtgaaccgcatggcc
gacgacctcatcaacgccggtcacacagacgcagcgacggtggccgagtggaaagacggt
ttgaacgaggcctgggcggacctgctcgagctcatcgacacacgtacgcagatcctggcc
gcttcctacgagctgcacaaattctaccacgacgccaaggagattctaggccgcatcctg
gacaaacacaagaaacttccggaagagctgggacgtgaccagaacacggtggagaccctg
cagaggatgcacaccacctttgagcacgacattcaagcgctcgggacgcaggtaagacag
ctacaggacgacgccgtgcgtctgcagtcggcgtacgccggagacaaagccgacgacatc
cagaggcgagagggtgaggtgctggaggcctggcgctgtcttctggaggcctgcgagggc
cggcgggcgcgactgctcgacaccggagacaaattccgcttcttcagcatggtgcgtgac
ctcatgctgtggatggaggacgtcatccgtctcatcgagactcaggagaagcccagggac
gtgtcctctgtggagctcctcatgaacaaccatcagggcatcaaggcggaaatcgacgcc
cgaaacgacagcttcaccgcatgcatcgagctgggaaaatctctcctggcacgcaaacac
tacgcttcggaggagattaaagagaagttgcttcagttgacggacaagaggaaagatatg
attgacaagtgggaggacagatgggagtggctgagactgattttggaagtgcaccagttt
tcgcgggacgcgggagtggcagaagcgtggctgctgggacaggagccgtacctgtccagc
agagagttgggacagagcgtggacgaggtggagaaactcatcaaacgacacgaagccttc
gagaaatcggctgcaacctgggaggagcgcttttcggcgctggaacgactgactacgttg
gagttattggaagtgagaagactgcaagaggaagaagagagaagaaggaagccacccaca
ccagaacctgcacaggacacagacgcacaacagcgagacggagagcagatcgctcagaac
ggacttccgtccgaccaggactctccacgggatggggtggagggtgagatgaacggggtg
cctgagaaaagctcaaaggaggggagtcccgtcccatctccgaccgcggaaagacgagcc
aaaggcagccagtcgtccacgctgcccgctaaaggccaggactccccgactgctcagctc
gagggattgttacatcgcaaacatgagtgggagggtcacaacaagaaagcgtccaacaga
tcttggcataacgtgtactgtgtcatcaataatcacgagatgggcttctacaaagataat
aagacagcgggtcagggcattccgtatcacaatgagatccccatcagtctgaaagaggcc
gtctgtgaggtcgctgtcgactacaagaagaagaagcatgtttttaaactcagacttact
gatggaaacgagtatctcttccaagccaaagatgatgaggagatgaacacatggattcag
gccattcagaatgccggcagcgcttcttcatcctccgagaaaaccgagatcacgcctagc
aaccagagcaccccggcctccagccgcgcccacacgctcccggcaaccgtcaccctgatg
accgagtccagccccggcaagcgcgagaaagacaaagagaaggacaaagagaaacgcttc
agcctgttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
