Triplophysa rosa: 130570970
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Entry
130570970 CDS
T09216
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tros
Triplophysa rosa
Pathway
tros02010
ABC transporters
tros04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130570970 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130570970 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tros02000
]
130570970 (abca7)
Transporters [BR:
tros02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130570970 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
130570970
NCBI-ProteinID:
XP_057217516
LinkDB
All DBs
Position
LG20:6028393..6053240
Genome browser
AA seq
2334 aa
AA seq
DB search
MTIGTQLYLLLWKNFTYRRRNKVQLVIELLWPLFLFLILIAVRQSHPPYKQSQCHFPNKA
LPSAGTLAWLQGIICNINNPCFHHPTSGETPGRVSNFDNSILSRLLVDLRTVLSVSGNQT
ALSGLQDLSLAVQRLGERPDAWPNLTVGEYLRANESFTSFLRSNTSIPSEYVDQLLTARL
NLQVVALAGGGLRLSDVVCNASLLSHYLTVKDGDSFPELQGALCAVPSDIMQRAEQIFLS
QLDFSKILTRERLRANAADLRVLSRAVSSVSQELASVMDDISSLSSFSQLNSELRLLTPA
NRSALPHESFRAFSRIMCGHPEVGGERIPSFNWYEDHDIKSFLGRNGSEEKDLENDNSTT
PFCENLIRSLESNPLSRIVWRGIKPLFIGKLLYTPDTPVTRAVMAEVNKTFQDFQIMNEV
MEAWQKEGPRIKTFMESSVEIRLLQDLLRRPEVAVLVNLRLESTSWTASRIAQFLSTPDP
DTPRKDGAPPTWLDLYQDLNNTISTLSELTKCFSLNKLEGVATEGQLVERALELLEDRQF
WAGIVFLLPEASSSSLPPHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDLRYVWGG
FIYVQDLVERAVTRLHTDKEPNTGIYVQQMPYPCFVDDVFVRVLNRSLPLFMTLAWIYSV
AMIIKGVVYEKEARLKETMRIMGLSSGMLWLSWFISSFLPFLFSAGLLIAALKVGDILPY
SDPAVIFFFLTAFATATIMLCFLISTFFSRANLAAACGGLVYFTLYLPYVLCLAWREYLS
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRSSPMEGDGYNFTTSIVMLYVDA
VIYALATWYIEAVFPGQYGIPRPWYFIFQLNYWGGVPLEVGLPIPPAPREEIDDRIEAEP
TNLILGVAIRNLVKIYKKGAKLAVNHLNIKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTIYVKGMDIRTDMDIIRKTLGVCPQHNVLFDILTVEEHVWFYGRMKGMNTEQVKAEI
NTLLEDVGLQHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYREGRTIVLSTHYMDEADLLGDRIAIISQGKLCCCGTPLFLKARLGTGYYLTLVKR
DMHRTPSSTSTGKLLSTVVTKDSDSSVSNDTGLGSEDNGFDVSALLTFAQQYIPHARLVE
DIGREAVINLPHAASEDGSLAIFLHELDKRQGEFGVVSYGLSDATLEEIFLRVAEETGVD
ADPEDPVASPSHQGAPSENKDIGLKQPIRTEAQETEPLSGVGQGGGAPLTGWFLMWQQLR
ALFTKRLKYALRSRRGIFAQIVLPAFFVLIALLFSLIVPPFGKYPPLELQPWMYGEQFTF
LSNDAPHDPDIQNLLDALLEPPGFGTKCMNSSSDPQCSEDINSKSLRPQIPYSMWQLFNK
GNWSVERLSPDCECSTENIRRMLPECPEGAGGLPPPQMKRLTGDILQNLTGRNISDYLIK
TYPQILKKSMKTKKWVNEFRYGGFSLGAKSSQAVDEPQHIEESVLAIRRRYSIPENSSFD
QLLHRLPGVLKGLASQNNVKVWFNNKGWHAMASFVNIMNNGLLRANLPPGLERRKFGMTA
FNHPLNLTKEQLSEMALMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKSKHLQFVS
GVKPILYWTTNYIWDMFNYTVPAAMVVLIFISFQQESYVSEKNLPALVLLLLLYGWSITP
LMYPASFIFSVPSTAYVVLTSINLFIGINGSIATFVLELFIDEHLNEVNRILKKVFLIFP
HFCLGRSLIDMAKNQAMADAFQRLGTKQNLEPLSWDFVGKNLFAMAMEGIVFFIFTVLLQ
YKFFINLSLWSGFVLPPIGMEDEDVARERERVKNGRAQGDILTLTDLSKVYKAGRKPAVN
RLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTSITYGEAFLSNHSVLTEMEKVHQLMGY
CPQFDAISDLLTGREHLEFYARLRGVPEAHVTKVAQWGIQKLGLSQYADREAGGYSGGNK
RKLSTAISLIGAAPVIFLDEPTTGMDPKAKRFLWNCILSVIKEGRAVVLTSHSMEECEAL
CTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSAPTKEPCPVDAYIQNSFPGIQLKE
RHQNVLQYQLPSQACSLARVFEVLSNTYEELGIAEYSVSQTTLDQVFVNFAKEQTDDDQL
REVVVNGGCAAAQPSRPQRPTHLRLEKPNRPLSPTSASTDQAAHSRLTPEPRSAGSKTRK
SRSNSPSVSRKQKQQIQMEPVGEAANGSKPAGHQTSKDPSALFVVKSKTKDSKM
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgactattggaactcagctgtacctgctgctgtggaaaaacttcacgtatcgcaggaga
aacaaggtccaactggtcattgaactcctctggccgctctttctcttcctcatcctcata
gcggtccgtcaatcacacccgccgtataaacagagccagtgtcactttccaaacaaggcg
cttccatcggctggcacgctggcatggcttcagggcatcatctgcaatatcaacaaccct
tgctttcatcaccccacgtctggagagacgcccggccgagtgagcaacttcgacaactcc
atactctcacgacttttagtcgatctcaggaccgtcctcagcgtcagtggaaaccagacg
gctctctctggcctacaagacttgtcgctggcagttcagagactcggggagagaccagat
gcctggccaaatcttacagttggtgaatatctcagagccaatgaaagcttcacatccttc
ctgaggtcaaacaccagcatcccctcagaatatgttgatcagctcctgacggcacgactc
aaccttcaagtggtggcgttagcaggtggagggttgcgtctgtctgacgtcgtctgcaac
gcgtccctcttgagtcattacctcaccgttaaagatggagattctttccctgagcttcag
ggggcgctgtgtgcggtcccatcagatataatgcagagagcggagcagatctttctctct
caactggactttagtaagatcctcacgagagaacgattgagagcaaacgcggctgatctg
cgagtcctcagcagggccgtgtcctccgtgtctcaggaactggcctcggttatggatgac
atctcctctctgtccagtttctcacagctaaactctgaactaaggcttttaacacccgca
aaccgttccgctctgccacacgagagctttcgtgccttctccaggatcatgtgtggacac
ccggaggtgggtggagagagaatcccctcattcaactggtatgaagaccacgacattaaa
tcattcctggggagaaatgggtccgaggaaaaggacctagaaaatgacaacagcaccact
ccattttgtgaaaacttgatccgaagccttgagtcaaaccctctctcacggatcgtgtgg
cgtggcatcaaaccgctgtttatcgggaagctgctatacacaccggacacgccggtcacc
cgtgctgtcatggcagaggtgaacaagacatttcaggacttccagattatgaatgaggtg
atggaggcgtggcagaaagaaggtcccagaatcaaaaccttcatggagagcagcgtggaa
attcgacttctacaggatcttctcaggagacctgaggtggcagtgctcgtgaacctgcgc
ttggagagcacctcctggacggcctctcgtatcgcccagtttctctccacacctgacccg
gacacgccccgtaaggatggagctccgcccacctggctggatctttatcaagatttaaac
aacaccatcagcactctgtcagagcttactaagtgcttttctttaaataaactggagggc
gtggccactgagggtcagctggtcgagcgagctctggagctgcttgaagatcgtcagttt
tgggctggaatcgtcttcctcctcccggaagcttcatcatcctcactgcctcctcatgtg
aagtataagatccggatggacatagatgacgtaacccgcacgaacaagatcaaagacaag
ttttgggatccaggcccggctgctgagcccttcagtgaccttcgctacgtttggggcggt
tttatttacgtgcaggatttggtagagagagccgtcacccgtttgcacacagataaagag
ccaaacacaggcatatatgtgcagcagatgccttacccctgctttgtggatgatgtgttc
gtacgtgtcctgaatcgttctttacctctgtttatgacactggcgtggatctattctgtg
gcgatgatcataaaaggtgtagtgtacgagaaagaggctcgtctaaaagagaccatgcgt
attatgggattgagttctggaatgctgtggctcagctggttcatcagcagttttctgccc
ttcctcttcagtgctggtctccttatcgccgcccttaaggtgggagatattttaccatac
agcgaccccgccgtcatcttcttcttcctcactgctttcgccacggccaccatcatgctt
tgtttcctcatcagcacgttcttctcgcgtgccaacctggcagcagcatgcggagggctg
gtgtacttcaccctgtacctgccgtatgtgctgtgtctggcctggagggaatatctgagc
agtacacacaggatcttagcgagcttcctgtctcctgtggcctttggctttggctgtgag
tatttctctcagtatgaggaacagggtgttgggatccagtggtttaatctaagatccagt
cccatggagggagacggttacaatttcaccacatccatcgtgatgctgtatgtagatgct
gtcatctatgcattggccacctggtatatagaagctgtttttccggggcaatatgggatc
cccagaccctggtattttatcttccagttgaattactggggaggggttccactggaggtg
gggttacccattcccccagcacctagagaggaaatagacgatcggattgaagctgagcca
acaaacctcattctgggagttgccataagaaacttagtaaagatttacaaaaaaggggcc
aagcttgcggtcaatcaccttaacataaagttctatgagggccaaataacttcctttttg
ggtcacaacggtgctggcaagacaacaaccatgtcaattctaacaggcctgtttcctccc
accgctggtacgatatatgtgaagggaatggacatccgtactgatatggacatcatccgc
aaaactctgggagtttgtccacaacacaacgtcctctttgacattctgacagtggaggag
cacgtgtggttctacggccggatgaagggcatgaacacggagcaggtaaaggcagagata
aacacacttctggaggatgtgggcttacagcacaaacgccacgagcagaccaaaaacctt
tcaggtggcatgcaaaggaaactatccgtggccatcgcattcataggcgggtcaaaggtg
gtggtcttggatgagcccacagccggagtggacccctactcccgacgtgggatttgggac
cttctgctcaaatatcgtgaaggccgcaccatcgttctgtccacgcattatatggatgag
gctgatctgctgggggaccgcattgccatcatttcccagggcaagctttgctgctgcggc
acgcctctctttctcaaggcgcgtctggggacggggtattaccttacactggtaaagaga
gacatgcacaggacgcccagcagcaccagcacaggcaaactgctctccactgtagtgacc
aaggacagcgattcgtctgtgagtaatgacactggattgggcagtgaggataatggattc
gacgtgtctgccctgctgacctttgcacagcagtacattcctcatgcccgactggtggag
gacatcggcagagaggcggtgatcaacctacctcacgctgcctctgaggacggcagtcta
gccatctttttacacgagctggacaagcggcagggcgagttcggcgttgtcagttacggg
ctgtccgacgccacgttagaagagatctttctgcgggtggcagaggagactggtgtggat
gcagaccctgaggaccccgttgcatctccaagccatcagggggcaccatctgagaacaaa
gatataggactgaaacagccaatcaggacagaggcgcaggagactgaaccgctgagtgga
gtgggtcaggggggcggagctcctctcacgggctggttcctcatgtggcagcagcttcga
gcacttttcaccaagagactgaagtacgcgcttcgcagtcgcagaggcatcttcgcacag
attgttctgcctgcattttttgttctcattgctttactattcagtctcattgtcccacct
tttgggaagtatccacctctggagcttcagccgtggatgtatggagaacagttcactttt
ctcagtaatgatgccccacacgacccggacatacagaaccttctggatgcccttctggaa
cctcctgggttcgggaccaaatgtatgaactcaagcagtgacccacaatgttcagaggac
atcaattccaagtctctccggccacagattccctacagcatgtggcagctctttaataaa
ggcaactggagcgttgagcgcctgtcccctgactgtgagtgcagtactgagaatatccgc
aggatgctgcccgaatgcccagaaggagctggaggcctcccacctccacagatgaaacga
ttgactggtgacattctgcagaacttgacaggacgcaatatttctgactacctcatcaaa
acatatccacagattctgaagaaaagcatgaagacaaagaagtgggtgaatgaatttagg
tatggaggtttttctctgggggccaaaagctctcaggctgtggatgaaccgcagcatata
gaagagtctgtgttggccattagaagacgctacagtattccagagaatagctctttcgat
cagctccttcacagacttccaggtgtcctcaaaggcctcgccagccaaaacaatgtgaag
gtctggtttaataataagggatggcacgccatggcatcgttcgtgaacatcatgaacaat
ggactcctacgtgccaacctaccacccggcctggaaagacgcaaattcggaatgacagcc
ttcaatcatccactcaacctcactaaagagcagctgtcagagatggccttgatgaccacc
tcagtagacgtcctggtgtccatatgcgttattttcgccatgtcattcgttcccgccagt
ttcgtgttgtttctcatcgaggaacgtgtcagtaaatctaaacacctgcagtttgtcagt
ggagtgaagcccatcctgtactggaccactaactacatatgggacatgtttaactacaca
gttcctgccgccatggttgttctgatcttcatcagcttccagcaggaatcatatgtgtct
gagaagaatctacctgcgctggtgcttctgctgctgttgtatggctggtccatcactcca
ctgatgtacccggcgtccttcatcttctcagttcccagcactgcttacgtggtcctcacc
tccatcaacctgttcatcggcatcaacggcagcatcgccacattcgtcctggagctcttt
attgatgagcatctgaatgaggtcaacagaatcctaaagaaggtcttcctgatctttcct
cacttctgtctgggtcgaagtctcattgacatggccaagaaccaggctatggcagatgca
tttcagcggctgggaaccaaacagaacctggagcctttatcctgggatttcgtggggaag
aacttgtttgccatggcgatggagggcattgtgtttttcatcttcactgttctgctgcag
tataaattcttcattaatttgagcttgtggtcagggtttgtgctgcctcctattggcatg
gaggatgaagatgtggctagagaaagagagcgagtgaagaacggtagagctcagggagac
attctcaccctcacagacctgagtaaggtgtataaggcaggcaggaagccagcagtgaat
cgactttgcttgggaattcctcgaggagagtgttttggacttctgggtgttaacggggct
ggaaaaacctcaaccttccgtatgctgactggagacaccagcatcacttatggagaagcg
tttcttagcaaccacagtgttcttacagaaatggagaaggttcatcagctgatgggctac
tgtcctcagtttgatgccatcagcgacctgctgacgggccgagagcacctggagttttac
gctcgcctcagaggagtgccagaagctcatgtcacaaaggtggcgcagtggggcatacaa
aagctgggtctgagtcagtatgcagatagagaggctggcggatacagcggaggaaataag
cgcaaactctcaaccgccatttccctcattggagctgcacctgtcattttcctggacgaa
cccacgaccggtatggacccgaaagccaaacgcttcctttggaactgtatcctcagtgtt
atcaaggagggacgagctgttgttctcacttcccacagtatggaagaatgtgaggctctg
tgtacccgaatggccatcatggtgaatggcagattccagtgtctgggctcagttcagcac
ctgaagaacaggtttggagacggttatactattatcctccgcttgtccgctccgactaaa
gaaccatgtccagtggacgcctacatccagaactctttccctgggattcagctgaaggag
agacatcagaatgttctccagtatcagctaccgtcacaggcctgttcattggctcgtgtc
tttgaggttctgtcaaatacctatgaggagttgggaatagctgaatactcggtgtcacag
actacactggatcaggtgtttgttaactttgctaaagagcagacggatgacgatcagctc
agggaggtcgtggtaaacggtggatgtgcggcagctcaacccagcagacctcagcgaccc
actcatctcagattagagaaacccaacagaccgctctcacccacatctgcctccacagat
caggctgctcactcgagactaacacctgagcctcggtcagccggctcaaagaccagaaaa
agcagatcaaacagtccatctgtctccagaaagcagaagcagcagattcagatggaacct
gttggcgaggccgctaacggatccaagcccgctggacaccagacgtccaaagacccatca
gcactgtttgtcgtcaaaagcaaaacaaaggacagcaaaatgtga
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integrated database retrieval system
