Triplophysa rosa: 130571041
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Entry
130571041 CDS
T09216
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130571041 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130571041 (si:dkey-3h3.3)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130571041 (si:dkey-3h3.3)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130571041 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
KH_DTX3L
zf-RING_11
zf-RING_10
zf-rbx1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130571041
NCBI-ProteinID:
XP_057217699
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All DBs
Position
LG2:16950182..16953582
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AA seq
420 aa
AA seq
DB search
MASPPLRAICNKVKLNIDSSTRRLLQDANVTAERKDDYLVASGTFEDVNKTFQYLNAHDT
YSVHSNDEMNTRSYAIAGRSLPPAQALEVDETVMRYIKKRKPEQFERIKRNHVELEERKR
HVTFSSLTGENIHAQLAREEFITLYQKTATGLQTREYDSHPKMMDRLSAEFPDLLIDTSR
DKLMLTGSFISLERFETFLSDEGSSRNQVLNTARHYGTHDIQPVIQKNTTVEAKQETCPI
CLDTIRKGDCEVLPKCKHCFCKGCLKSAFQLKPICPVCGEMYGSLTGTQPKGGTMNVSRD
NSSLPGYERYGTIIINYHIPNGIQQDEHPNPGRSYQGAARTAYLPDSSEGRKVLKLLERA
FDQRLTFTIGHSSTTGRNNVVTWNDIHHKTSRTGGPTNYGYPDPEYLKRVQDELKAKGIY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccgccattacgagcgatatgtaataaagtgaaacttaatatcgattcatcc
accagacgcctacttcaagacgcgaatgttacagctgaacgtaaagatgattatttggtt
gccagcggcacattcgaagacgtaaataaaacgtttcagtatttaaatgcacacgataca
tatagtgttcattcaaacgatgagatgaatacgagaagctacgccatagcaggtcgctcc
ttaccaccagctcaagcacttgaggttgatgaaactgtcatgcgttacatcaaaaaaaga
aaaccggagcagtttgaaagaatcaaaaggaatcacgtcgaacttgaagaacgcaaaaga
cacgtgaccttttcgtctttgactggagagaacatccatgctcaacttgcgcgagaagag
ttcataacattatatcagaaaactgcaacagggctgcaaacccgagaatacgattcacat
ccaaaaatgatggaccggctcagtgcagaatttccagatctcctgatcgacaccagtaga
gataagctgatgctgaccggtagcttcattagccttgagagatttgagacgtttttaagt
gatgaaggctcttcacggaaccaagtcctaaatacagcaagacactatggtacacatgat
atacaacctgtgatacaaaagaatacaacagtcgaagccaaacaggagacatgtccaatt
tgtctagatacaatcaggaagggtgactgtgaagtcttgcctaaatgcaagcactgcttt
tgtaaaggctgtttgaagagtgctttccagctaaaacctatttgtccagtttgtggagag
atgtacggcagtcttacggggacacagccgaaaggaggaaccatgaatgtctcaagggat
aactcatccttacctggatatgagagatatggaacaatcataattaactaccacatacca
aacggaattcagcaggatgaacaccccaacccaggccggtcttaccagggagcagctcgc
accgcttacctccctgattcatcagagggcaggaaagtactgaagcttctggaaagggca
tttgaccagcgactcactttcactattggtcattcctctaccactggaaggaataatgtg
gtgacctggaatgacattcaccataaaacatctcgtactgggggaccaacaaattacggt
tacccggatccggagtacctgaaacgagtccaagatgaactgaaagcaaagggaatttat
tga
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