Triplophysa rosa: 130571117
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Entry
130571117 CDS
T09216
Symbol
comp
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
tros
Triplophysa rosa
Pathway
tros04145
Phagosome
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130571117 (comp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130571117 (comp)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130571117 (comp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130571117 (comp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130571117 (comp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130571117 (comp)
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130571117 (comp)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Phagocytosis
Opsonins
130571117 (comp)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130571117 (comp)
Exosomal proteins of colorectal cancer cells
130571117 (comp)
Exosomal proteins of bladder cancer cells
130571117 (comp)
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130571117 (comp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
EGF
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
130571117
NCBI-ProteinID:
XP_057217867
LinkDB
All DBs
Position
LG20:complement(6557091..6566444)
Genome browser
AA seq
749 aa
AA seq
DB search
MQWTLLFSSCLCLLPVLLSAQGISRDGEIIKQIKGTNQELAEIKELLKQQIQEIVFLKNT
VMECEACGMRPVEPQNACDPNPCHSGVECIITPGGFRCGPCPDGLTGNGTHCMDVDECSV
MPCHMGVRCINTSPGFRCGPCPAGYAGPQVQGVGLAYASANKQICADINECENSNGGCVE
NSNCVNTPGSFRCGRCKPGYHGDQVKGCKPERACGNGQPNPCHASAECIVHRDGQIECVC
GVGWAGNGYLCGADTDIDGFPDEKLKCDERNCAKDNCLTVPNSGQEDADKDNIGDACDDD
ADGDGILNTEDNCVLVPNVNQKNNDQDDYGDACDNCRLIKNNDQKDTDGDGDGDECDDDI
DGDGIKNNQDNCKKVPNRDQKDRDGDNVGDACDSCPYIRNPDQTDVDNDLIGDPCDTNKD
SDGDGHQDSRDNCPAVINSSQLDTDKDGIGDECDDDDDNDGIPDLLPPGPDNCRLVPNPL
QEDFDGDGIGNVCENDFDNDTFSDVVDVCPENAEVTLTDFRTYQTVVLDPEGDAQIDPNW
VVLNQGREIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTETDDDYAGFIFGYQDSSSFYV
VMWKQVEQIYWQANPFRAVAEPGIQLKAVKSDTGPGENLRNSLWHTGHSSNQVKLLWKDA
RNVGWKDKTSYRWFLQHRPQEGYIRVQFYEGTQMVADTGIIIDTTMRGGRLGVFCFSQEN
IIWANLRYRCNDTIPEDFEAFRTQQIQLF
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggacgctcttgttcagctcttgcttatgcttgctacccgttctgctttctgct
caaggaatatccagagatggagagattatcaaacagattaaaggcacaaaccaagagctt
gctgaaatcaaagaattattaaaacaacagatacaggaaattgtttttctgaagaacacg
gttatggagtgtgaagcctgtggcatgcgaccagttgaaccgcagaacgcatgcgatcct
aacccctgccactctggtgttgaatgcattataacacccggtgggttcaggtgtggccca
tgcccagatggtctgacaggaaatggaactcattgtatggatgttgatgagtgttcggta
atgccatgtcacatgggggtgagatgcataaatacatcacctggtttccgctgcggccct
tgtcctgctggttacgcgggtcctcaggtgcagggggtaggacttgcatacgcatctgcc
aacaagcagatctgcgcagacattaatgaatgtgagaactcaaatggaggctgcgtggag
aactccaactgcgtcaacacaccgggttcttttcgctgtggccgctgtaagcctggttat
catggggatcaggtgaaaggctgtaaaccagagcgtgcttgtggcaacgggcagccgaac
ccttgccacgccagtgcagaatgtatcgttcaccgtgatggacagatcgaatgtgtgtgt
ggagttggatgggctgggaatggatacttgtgtggagcagacactgatatcgatggcttt
cctgatgaaaagttgaaatgtgatgagaggaactgtgcaaaggacaactgtctcactgtt
ccaaactctggccaagaggatgcagacaaagacaacattggtgatgcatgtgatgatgat
gcagatggagatggcatcttaaacacagaagacaactgtgtcctcgtccccaatgtgaat
cagaagaataatgaccaggatgattacggagacgcttgcgataactgtcgtctgatcaaa
aacaatgaccagaaggacacagatggcgatggtgacggtgatgaatgtgatgacgacata
gatggagatgggatcaaaaacaaccaggataactgcaaaaaggtaccaaaccgggaccag
aaagacagagatggtgataatgttggtgatgcttgcgacagttgtccttacatccgcaac
cctgatcagacggatgtggacaatgatttaattggcgatccttgtgacaccaacaaagac
agtgatggagatggtcatcaggattcccgagacaactgtcctgcagtgatcaacagctcc
cagctggacacagacaaggacggcattggagatgaatgtgatgatgatgacgacaacgat
ggcattcctgatctccttccacctggtccagacaactgccgtctggtaccaaacccactg
caggaggattttgatggcgatggaattggcaacgtttgcgagaacgacttcgacaatgac
acatttagcgatgttgttgatgtttgtcctgagaatgctgaggtcactctcactgacttt
agaacttatcagactgttgttctggatccagaaggtgatgcacagattgatccaaactgg
gtggtgctcaatcagggaagagagattgttcagaccatgaacagtgatcctggactggct
gtgggctacaccgcattcaatggcgtggactttgaagggacgtttcacgtgaatactgag
acggatgatgactacgcaggcttcatcttcggctatcaggacagctccagtttctacgtg
gtgatgtggaaacaggtggagcagatctattggcaagccaatcctttccgggctgttgcc
gagcctggtatccaacttaaagcagtgaagtcagacactggtcctggagagaacctccgc
aactcactctggcacacaggtcactcatccaaccaggtgaaactcttgtggaaagatgcc
agaaatgttggctggaaagataagacctcctaccgttggttcctccagcacagacctcaa
gaaggttatatcagggttcagttctacgaaggcacacagatggtggcagacacaggaatt
atcattgacacaactatgagaggaggcagactcggagttttctgcttttctcaagagaac
atcatctgggccaacctgcgctaccgatgcaatgataccattcctgaggactttgaggca
ttcagaacccagcaaatccagcttttttaa
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