Triplophysa rosa: 130571186
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Entry
130571186 CDS
T09216
Symbol
sema3fb
Name
(RefSeq) semaphorin-3F
KO
K06840
semaphorin 3
Organism
tros
Triplophysa rosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
ig
Ig_6
Ig_2
PSI
I-set
V-set
Motif
Other DBs
NCBI-GeneID:
130571186
NCBI-ProteinID:
XP_057217976
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Position
LG20:complement(17296780..17352582)
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AA seq
787 aa
AA seq
DB search
MLLESPWAVQILLALCVLTLGLENDPQNSPRVYLSFKDLRSTETAHHFSFLLNTSDYRIL
RMDEDHDRMYVGCKDYILSLDLHDINREPLIIHWPVTPQRKTECVLSGKDTHGECGNFVR
LIEPWNRTHLYVCGTGAYNPVCTYVNRGRKPMTAMSLQMPQTKGRTSRAAEPEVVFDETG
LQESVFFLEPGREDSGKGKCPYDPKLNSVSALINGELYAGVYIDFMGTDSAIFRTLGKNA
VMRTDQYNSRWLNDPSFVHVHLIPDSNEKNDDKLYFFFREKSSEMGQSPKSQARIGRICM
KDDGGHCCLVNKWSTFLKARLICSVPGVDGIETHFDELRDVYIQPTQDTKSPVIYGVFSV
SGSVFKGSAVCMYSMADIRMVFNGPFAHKEGPNYQWVAYTGKIPYPRPGTCPGGTFTPSM
KSTKDYPDEVINFMRNHPTMYNVVYPMHKRPLVVRTNVDYEFTTIAVDQVTAADGSYEVL
FLGTDRGTVQKVIVLPKDDQQTEELVLEEVEVFKVPTAITTMKISSKRQQLYVASEVGVT
HLALHRCDVYGEACADCCLARDPYCAWDGSSCSRYSASQKRRSRRQDVKYGNPIRQCRGY
NSNSNKNTLESVQYGVEGSSTFLECQARSPHAAIKWHLHRDNSDRRREVRSDGRVLKTDP
GLLLRSLQTSDSGIYVCTATEKNFKHTLVKLQLVVLTNQAVNNILVETGRPAASSLQSSA
WTPSSGQYKDLLTILSQPEMGLINQYCQDYWQYGDPLTGGIKSKDLKELKEQKKPRNRRH
HGDEEET
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggagagtccttgggcagtccagattctcctggctctatgtgtcctgacattg
ggtttggaaaatgaccctcagaattccccccgggtctacctctccttcaaagatctgagg
tctacagagacagcccatcatttttccttcctgttgaacacatcagactatcgcatcttg
cgcatggacgaggatcacgaccgcatgtacgtgggctgcaaagactacatcttgtccctc
gacctccacgacatcaaccgagagcccctcattatacactggcctgttactccacagagg
aagacggagtgtgttttaagtggcaaagacacgcacggcgagtgtggtaacttcgtccgt
ctgatcgagccgtggaacaggacgcacctgtacgtgtgcgggacgggcgcctacaaccct
gtgtgcacctacgtgaaccgaggacgcaaacccatgacggccatgagtcttcagatgccc
cagaccaaaggaagaactagtcgtgcggccgaacccgaagtagtgtttgatgagacagga
ctacaggaatctgtcttcttcttagagccgggcagagaggattctggaaagggaaaatgt
ccatatgacccaaagttgaacagcgtctctgctttgatcaatggagagctctatgcgggg
gtgtacattgacttcatgggcaccgactcagctattttccgaactttgggaaaaaacgct
gtcatgcgtactgaccaatacaactccagatggttgaatgatccctcctttgtacatgtg
cacctcatccctgacagcaacgagaaaaacgacgacaagctttactttttcttccgcgag
aagtcttccgagatgggccagagtcccaaatcccaggctcgcatcggccgaatctgcatg
aaagatgacggtggtcactgctgtttggtcaacaagtggagcaccttcctgaaagcccgt
ctcatctgctccgtcccgggggtggatgggattgaaacgcatttcgacgagctccgggat
gtgtatatacagcccactcaggacactaaaagtccggtcatctacggagtcttctctgtt
tctggttctgtattcaaaggctccgctgtttgcatgtactccatggcggacattcggatg
gtgttcaatggaccttttgcacacaaagaaggccccaattatcaatgggtggcctacact
ggcaaaatcccatacccccgtccaggaacatgtcccggtgggacattcacccccagcatg
aagtccacaaaagactacccagacgaggtcatcaacttcatgaggaaccatcccaccatg
tacaacgtggtgtatccaatgcacaagcgccccctggtggtcaggaccaatgtggactat
gagttcaccaccattgctgtggaccaggtgactgctgctgatggaagctatgaagtgctc
ttcttggggacagacagaggtacagtgcaaaaggtcattgtcctgcctaaagatgatcag
cagacagaagaacttgtcctggaggaagtggaggtctttaaggtacctactgctatcaca
acaatgaagatttcttcaaaacggcaacaactgtatgtggcgtctgaggtgggcgtgact
cacctggctctgcacaggtgtgatgtttatggcgaggcgtgtgcagactgctgtctggcc
cgggacccttactgtgcctgggacggatcctcctgctctaggtactcagcctctcagaag
agacgcagtcgccggcaggatgtgaagtacgggaaccccatacggcaatgcagaggatac
aattccaactccaataagaacacactggagtctgtacagtatggggtggagggcagcagc
acgtttctggaatgccaggccagatctcctcacgcagccattaaatggcatctccataga
gacaacagtgaccggagacgagaggttcgcagcgatggccgtgttttaaagacagacccg
ggcttgctcctccgatccctgcagacctctgattctggaatctacgtctgcacagccacg
gagaagaacttcaagcacaccttggtcaaacttcagctggtggttttgaccaaccaggcc
gtcaataacatactggtcgaaacaggccgaccagcagcgtcttcactccagtccagcgcc
tggacccccagctccggacagtacaaagaccttctgaccatccttagtcagcccgagatg
ggcctcataaatcagtactgccaggactattggcagtacggagacccgctgacaggaggc
atcaagtccaaagacctgaaagagctcaaggaacaaaagaagccgaggaatcgcagacat
cacggggacgaagaggaaacatga
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