Triplophysa rosa: 130571189
Help
Entry
130571189 CDS
T09216
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
tros
Triplophysa rosa
Pathway
tros03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130571189 (cstf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130571189 (cstf1)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
130571189 (cstf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
CSTF1_dimer
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_Aladin
CFAP251_N
ASA1
PAC11
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
DSE1_N
Ge1_WD40
Beta-prop_SPT8
Beta-prop_WDR75_2nd
DUF7099
Frtz
Motif
Other DBs
NCBI-GeneID:
130571189
NCBI-ProteinID:
XP_057217981
LinkDB
All DBs
Position
LG20:complement(14133562..14136400)
Genome browser
AA seq
431 aa
AA seq
DB search
MFRPKPTLKDRQQLYRMIISQLLYDGYTTIANSLISEVKPPSVVSPSEQLMQLAKIGMEN
DDSAVQYAIGRSETVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNMENHPVIRTLYDHVDEVTCLS
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDTICGVCYNPSANSYVTCSKDGSIKLWDGVSNRCVTTF
EKAHDGAEVCSAVFSKNSKYILSSGKDSIAKLWEISTGRTLVKYTGAGLSGRQTHRTQGV
FNHTEDYVLLPDERTISLCCWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRTTTD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggcccaagcccacactgaaggacagacagcaactgtacaggatgatcatcagc
cagctgctgtatgatggctacacgaccattgccaacagcctgatcagtgaggtcaaaccc
ccgagtgtggtgtctccatcagagcagctcatgcagctggccaaaataggaatggagaac
gatgacagcgctgtgcagtacgccattggtcgctctgaaactgtggcacctggtgtggga
atcgacctggagtttgatgcagacgtgcagaccatgtctccagaagcatccgagtacgag
acctgctacgtgacttctcacaagggtccgtgtcgtgtcgccacttacagccgcgatggc
cagctcattgcgacgggctctgccgatgcctcgattaagatcctggacacggaacgcatg
ctggccaaaagtgcaatgcctctggaggtgatgatgaacgaaacggcccagcagaatatg
gagaaccaccctgtgatcagaacgttgtacgatcacgtggatgaagtcacctgtctatct
tttcacccgaccgaacagatccttgcctctggctcccgtgactacacccttaaacttttt
gattattcaaagccatcggccaaaagagccttcaagcacatacaggaagctgaaatgttg
cgctccatctcattccacccatctggagatttcctactggtgggcacgcagcaccccacc
ctgcgcctttacgatgtcaacacctttcagtgtttcgtgtcctgcaaccctctggatcag
catacagacaccatctgcggagtctgctacaatcccagcgctaacagctacgtcacctgc
agcaaagacggaagcatcaagctgtgggatggggtgtcaaaccgatgtgtgaccaccttt
gagaaagcgcacgatggcgccgaggtctgttcggcggtcttctccaagaactccaagtat
attctgtcaagcggaaaagattctatcgccaagctatgggaaatttccacaggccggact
ttggtgaagtacacaggcgctgggctcagtggtcgacaaacacaccgcactcagggtgtc
ttcaaccacacagaggactacgtgctgctgccggacgagcgaaccatcagtctgtgctgc
tgggactcacgaacagccgagaggaagaacttgctctcactgggccacaataacatagtg
cgctgcatcgtacactcgcccaccaacccgggattcatgacctgcagcgacgacttcaga
gctcgattctggtatcgccgcaccacaactgactaa
DBGET
integrated database retrieval system
