Triplophysa rosa: 130571204
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Entry
130571204 CDS
T09216
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130571204 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130571204 (trim25)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130571204 (trim25)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130571204 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_6
DUF6762
Motif
Other DBs
NCBI-GeneID:
130571204
NCBI-ProteinID:
XP_057218014
LinkDB
All DBs
Position
LG20:complement(9407480..9416332)
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AA seq
679 aa
AA seq
DB search
MAENMSLLSLEDDLTCSICLGLFENPVSLICGHSFCANCLEATWNDRTTSMFCPHCRMPF
SSKPGLKKNTVLSAVVDAYRVKAGVPDPVMEHVEETRTDPDQIKCDTCMEAEAVKTCLTC
MASYCEDHVRPHRDNAIFRAHQLSDPLPDLLERLCPDHSKLMEFYCTHHQCCICSTCLQY
EHKGCEFTGTDEQRHKQKTGFMDKLNTLDVKIDKNQQVVLQMKEQQNKLKELVLTRKRIL
EGEYRKIRELIDRDEMEAMLAIDKEQEKGQNRLVSLMKKFNENIDRMSSTKSEINSLLDQ
SHSLTFLKASVDLPSVVNFEPYNPRINVDSQGVIAHHSSAVGLKEWITKLLELPAEKRIP
LLQAGFREPGFCIGPILTLGNQSSIPTVQPNFTQPRPFMPPRHVRSPSPGAPLRAKASGA
KKKDPHSKSHANTDQKDQRERKERKDRKEQSPNRVDQKDFEQWRQALQNTFQNTPARLMT
GVSVPDGSLAGDGFAKRSDLLKYGTILSFDVRTTHKRIVLSENDTKATVTDEPTNYSDIH
TRFAVCSQVLCTKGFSQGRHYWEIKMSSNNFCGLGLAYGTIDRKGPSSRLGRNAESWCVE
WFNVRLSAWHNSIETVLENPNPSRVGILLDCDEGSATFYNVKDRAFPFHTFVFPFSKPVY
PAFWIFSNGSNVSLCKLTS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaacatgtctttactgagtctcgaggacgatttgacctgcagtatctgtttg
ggtttattcgagaacccggtgagtttgatctgtggacacagtttctgcgccaactgcctc
gaagcgacatggaacgacaggacaacatcgatgttttgtcctcattgccgaatgccgttc
agcagtaaacccgggctgaagaagaacacggtcctcagcgcggtggtggacgcttataga
gtgaaggcgggtgtgcctgacccagtaatggaacatgttgaggaaacaagaacggatcca
gaccagatcaaatgtgatacatgcatggaggccgaagctgtgaaaacttgtctgacgtgt
atggcgtcttactgcgaggatcacgtcaggcctcaccgggataatgccatattccgggcg
catcagctctctgacccgcttcctgatctgctggagcgtctttgtcccgatcacagcaaa
ctcatggagttttactgcactcatcaccagtgctgtatctgtagcacttgcctacagtat
gaacataagggctgtgagttcaccggcacagatgaacagcgccacaaacaaaagactggc
ttcatggacaagctgaacactctcgatgtcaaaatagacaagaatcagcaggtcgtcttg
cagatgaaggagcaacaaaacaaattaaaggaattggttctaacccgcaaacgtattctt
gagggagaatacagaaagatcagagaattgattgacagagatgagatggaggccatgcta
gccattgataaggaacaggagaagggccagaacagactggtttccttgatgaagaaattc
aacgagaacatcgataggatgagcagtaccaaatctgagatcaacagtttgctggaccag
tcacactcacttaccttcctaaaggcctctgtggatttgccttcagtggttaattttgag
ccctataatcctcgcattaatgttgatagtcaaggagtaatagctcatcactcatctgcg
gttggactaaaggaatggatcactaaactactggagttaccagcagagaaaagaattcct
ttacttcaagcagggtttagggaaccaggtttttgcattggaccaatccttactctcgga
aaccaatcctcaattcctacagttcaaccaaatttcactcaaccaaggccctttatgcca
cccagacatgtgaggtctcctagtccaggagctcctctcagagccaaagcttcaggagct
aaaaagaaagatccacacagcaagagtcatgctaatacagaccagaaagatcagagagag
cgtaaagagcgaaaggatcgtaaagaacaaagccccaacagagttgatcagaaagatttt
gagcaatggcggcaggcactccaaaatacatttcaaaatacacctgcgagattgatgaca
ggggtatcagttcctgatggttcattggcaggggatgggtttgctaaaaggagtgacctc
cttaaatatggaaccatcctcagttttgatgtcagaacgactcacaagcggattgtgctc
tctgaaaatgacaccaaagccacagtcacagatgagcccaccaactattcagacattcat
actcgctttgctgtttgctctcaggtgctctgcacaaagggcttttctcaggggcgccat
tactgggaaatcaaaatgagcagcaacaacttctgtggattggggcttgcatatggtaca
atcgaccgaaagggtccatccagtcgtttgggccgtaatgcggaatcctggtgtgtggaa
tggtttaacgtgaggctttctgcatggcacaacagcattgagaccgtgttggagaatcca
aaccccagccgtgtgggcatcctgctggactgtgatgagggaagtgcaacattctataac
gtgaaggacagggcttttccctttcacacttttgtgtttcctttctctaagcctgtgtat
ccagctttctggatcttctcaaacggctctaatgtctctctgtgcaagctcactagctaa
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