Triplophysa rosa: 130571247
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Entry
130571247 CDS
T09216
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130571247 (irx5a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130571247 (irx5a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130571247
NCBI-ProteinID:
XP_057218124
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Position
LG1:complement(20575042..20578509)
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AA seq
447 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYNTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLQYSADAAAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTP
RNRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLINPGEMPCDRFRDETHSKD
LDPLLTDSELKDSEERTDLLAEQAKPTTSSPSILQRGNDLITQEKQSEPGHATSTGSSNV
TSVIHSPPSAPKPKLWSLAEIATSSDRCKGSSEAPQAADLGQSTVIARAASPTRSSPQCP
LPSNTVLSRPIYYTSPFYPGYTNYSTFGHIHSSHGTNTGSTAHFNGLSQTVLNRAEALVR
ESKVRSQTHVDLCKDSPYELKKGMSNI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcagccatccgcctctttagcactctattcgtgt
cctgcctacaatacgagtgtgatatcgggaccccggactgaggaactggggagatcttcc
tctggctctgctttcgctccctatgccggatctacagctttcaccagcgcctcgccaggc
tacaattcccatctccaatacagtgctgatgcagccgccgccgctgccactttcacttct
tatgtgagctccccgtatgaccacacgacaggcatggccggatctatagggtatcaccca
tatgctgctcccttgggctcgtacccgtatggggacccagcttatcggaagaatgcaacc
cgggacgccacagccactctgaaagcttggcttaacgagcaccggaaaaacccgtacccc
accaaaggcgagaagatcatgctggccatcatcactaaaatgaccctcactcaagtgtcc
acctggttcgccaacgctaggagaaggttaaagaaggagaacaagatgacctggacccca
cggaaccggagcgaagacgaggaggaagacgaaaacattgatctagaaaaaaacgacgac
gacgagccaaacaagcccacagacaagggagactccacagacacagaggcagatcataaa
cttatcaacccaggggagatgccatgcgacaggtttagagatgagacacattctaaagat
cttgatccacttttgacagactcggaattaaaagactcagaggagaggacggacttgctc
gctgagcaggcaaaacccaccacctcttcgccttccattctacaaagagggaatgatctc
attacgcaagagaagcaatcagaaccgggccacgccacgagtacggggagcagcaatgta
acgtctgttattcattcccccccgtcggcgcccaaacccaaactctggtcactggccgag
atcgccacgtcttcggacaggtgcaaggggagcagtgaggctccgcaggccgcagacctg
ggtcaaagcacagtcatagccagagctgcctcgccgacccggtcgtcccctcagtgccct
ctccccagcaacactgtgctctctcggcctatttactacacatctcctttttacccaggc
tacacgaactatagcactttcggacatatccacagcagccacggcaccaacactggctct
acggcgcattttaatggattaagccagactgttttaaacagagccgaggctcttgtcaga
gagagcaaagtaagaagccaaacgcacgtagatctttgtaaagactcaccttatgagcta
aagaaaggtatgtcaaacatttaa
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