Triplophysa rosa: 130571289
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Entry
130571289 CDS
T09216
Symbol
cdh4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
tros
Triplophysa rosa
Pathway
tros04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130571289 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130571289 (cdh4)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Major cadherins
130571289 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Cytomega_TRL10
ECSCR
Orf78
Motif
Other DBs
NCBI-GeneID:
130571289
NCBI-ProteinID:
XP_057218147
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All DBs
Position
LG20:11028752..11264200
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AA seq
931 aa
AA seq
DB search
MANMKAGFAIVVACALVVSASLGRHGNAQTIAPCRPGFSQSFYTVFVPRGVLQGQNIHKD
TLLSSGHVKFETCQQIEKVYFESSDPKFSVQPDGSLYIQQDVANLTEPIQFMVTARDITD
KRIWETTVKLALAEHPPSPPINQIAGDGFYGGSSDNTYQNPRLITFPRQHQRGSTHGLRR
QKRDWVIPPINVPENSRGPFPQVLVRIRSDQDKEIEIRYSITGAGADQPPGDIYIIDPVT
GKMSVTKPLDREERASYHLRAHAVDINGNQMEPPIDLYIYVIDMNDNRPEFKNQVYNGSV
AEGSKPGTSVMQVTAFDADDSTTANGLVHYRILSQTPHIPIPNMFTINGATGEISTIAAG
IDREKVSQYSVIVQATDMEGSLNFGLSNTATALISITDINDNPPELDAKTFLGEVPENAV
GVVVANLTVRDKDQPHTPNWNAVYRIVGGDPMGHFAIRTDEITNDGRVIVVKPVDYERNG
AFMLTVVVSNQAHLSSGIPSSLSSTAGVTITVLDVNEAPVFPSNPKIIRFEEGVPAETTL
ATFAALDPDRFIQQTIRYSKLSDPANWLKINRTNGRITTTAVLDRESPYMKKNVYEATFL
AVDNGSPPATGTGTLQIYLIDVNDNMPVLVPQEALVCERSRHGYPVNITASDLDTEPNAG
PYVFELPSYPSSVRRNWTISRLNGNYAQLKLRIPYLESGVYRVSIVVSDSGNPPLSNTSV
LKVKVCPCDENGDCTVAGAVTVAGLGTGAIITILICIIILLSMVLFFVVWVKRREKERQT
KPLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIMSKPAGVRRVDERPVI
LESQYPVRPTVPHPGDIGEFIIDGLRAADNDPTAPPYDSLLVFDYEGTGSTAGSVSSLDS
SSSGEQDYDYLNDWGPRFKKLADLYGGGGED
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatgaaagcaggcttcgcgattgttgtggcgtgtgccttagttgtgagcgca
tctttggggagacacggaaacgctcagaccatcgctccatgccgaccaggtttctcccag
agcttctacactgtgtttgtccccaggggtgtgctgcaaggccagaacattcacaaagat
accctgctgtcttctggccatgtaaagttcgaaacctgccagcaaatagagaaggtttac
tttgagagcagtgacccaaagttcagcgttcagccggacggctctctttacatacagcaa
gatgtggcgaacctaaccgaaccgatccagttcatggtgacggccagagacatcacagac
aagcgtatctgggagaccactgttaaactcgcccttgctgaacacccaccatcacctcct
attaaccagattgctggggatggtttctatgggggatcctccgacaacacctatcaaaat
cctaggctcattacgtttccacgacaacaccaacggggctccacccatgggctacgacga
cagaagcgagactgggtcattccaccaatcaacgtgcctgaaaattcccgaggtcccttc
cctcaagttcttgtcaggattcgatcagaccaggacaaagagattgagatccggtacagt
ataacaggagcaggagcagaccagcctcctggtgacatctacatcatcgaccctgtgaca
gggaaaatgtctgtcaccaaacctctggacagagaggaaagagcctcctatcatctcaga
gcccatgcagtagatattaatgggaaccaaatggagcctcctattgatctatacatttat
gtcatcgacatgaatgacaacagacccgagttcaaaaaccaggtgtacaacggatcggtc
gcggaagggtccaagcctggcacttctgtaatgcaagtaacggcctttgacgccgacgac
agcaccacggcaaatgggctcgtgcactaccgcatcctcagccagacgccgcacatcccc
attcccaatatgttcaccatcaacggagccaccggagaaatcagcaccatcgcagcaggc
attgaccgtgagaaagtgtcacagtacagcgtcattgtccaggccacagatatggagggc
agcttgaacttcggtctgtccaacacagccactgccctcatttccatcacagacatcaac
gacaaccctcccgagctggatgctaaaacgttcctaggggaggttccggaaaatgccgtg
ggtgtggttgtggccaatttgacggtgcgagacaaggatcagcctcacacgcccaactgg
aacgccgtctataggattgtgggaggagatcccatgggacatttcgccatacgcactgat
gagatcaccaatgacggaagggtcattgtagttaagccggtggactacgagcgaaacgga
gccttcatgttaacagtggtggtctcgaaccaggctcatttatccagcgggatcccctca
tctctgtcctccactgctggtgttactatcacggtgttggatgttaacgaggctcctgtc
ttcccatccaaccctaaaatcatacgctttgaagaaggagtgcctgccgaaaccaccctc
gctaccttcgccgcactagatccagaccgcttcatccagcagactatcaggtactccaaa
ctttcagatccagccaactggctgaaaatcaacaggaccaatggaaggatcaccacgacg
gcggttctggaccgggagtcaccatatatgaagaagaatgtttatgaagctacctttttg
gccgtggacaatggttctcctccggccacaggaaccgggactcttcagatttacttgata
gatgtgaatgacaacatgcccgtcctagttccgcaagaggctctggtttgcgagaggtca
agacacggatatccggtcaacatcacggcgtctgatttagatacagaacccaacgctggg
ccatatgtctttgagctgccctcttacccgtcttctgttcgccgtaactggaccatctca
cggctcaatggaaattatgcccagttgaaactgcggatcccatacctggagtcaggcgtg
taccgagtttccattgtagtctcagactcaggaaaccctcccctgtccaacacttcggtc
ttgaaggtgaaggtgtgtccctgcgatgaaaacggagactgtactgtggccggggcggtg
actgtcgccgggctggggaccggagctatcatcaccatcctcatctgcattattatactg
ctcagcatggtgctgttctttgtggtatgggtgaagcgcagagagaaggaacgtcagacc
aaacctctattgatcgatcctgaagatgacgtcagagataatattctgaaatatgatgaa
gagggaggaggagaggaagatcaggactatgacctaagtcagctgcagcagcccgagtct
ctggatcatataatgagcaagcctgcaggtgtgaggagagtggacgagagacccgttatc
ctagaatctcagtatcctgtccggccaacggtaccacacccaggagacatcggggagttc
atcattgatggtctgcgtgcagcagataatgaccccaccgctcccccctacgactccctg
ctggtgttcgactacgagggcaccggctccacagcaggctctgtcagctccctggactct
tccagctctggggaacaggactatgactacctcaacgactggggtccgcgcttcaaaaag
ctggcggacctctacggaggagggggagaggactga
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