Triplophysa rosa: 130571464
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Entry
130571464 CDS
T09216
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
tros
Triplophysa rosa
Pathway
tros03030
DNA replication
tros03410
Base excision repair
tros03420
Nucleotide excision repair
tros03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130571464 (rfc4)
03410 Base excision repair
130571464 (rfc4)
03420 Nucleotide excision repair
130571464 (rfc4)
03430 Mismatch repair
130571464 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tros03032
]
130571464 (rfc4)
03036 Chromosome and associated proteins [BR:
tros03036
]
130571464 (rfc4)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130571464 (rfc4)
DNA replication proteins [BR:
tros03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130571464 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
130571464 (rfc4)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130571464 (rfc4)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130571464 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
130571464 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_22
AAA_16
AAA_11
Mg_chelatase
AAA_30
AAA_24
AAA_14
SLFN-g3_helicase
DUF815
AAA_19
AAA_28
RuvB_N
Gp44_lid
ResIII
DNAX_ATPase_lid
AAA_5
Kinesin
AAA_7
Motif
Other DBs
NCBI-GeneID:
130571464
NCBI-ProteinID:
XP_057218425
LinkDB
All DBs
Position
LG20:complement(21114367..21121529)
Genome browser
AA seq
371 aa
AA seq
DB search
MDQQKCFKCDGDMQAFLKGSSSQSVKAPKPSSSSSSSAGEKKQRAVPWVEKYRPKCVDEV
AFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELYRQRVLELNASD
ERGIQVIREKVKNFAQLTVAGSRTDGKPCPPFKIIILDEADSMTNPAQAALRRTMEKESR
TTRFCLICNYISRIIEPLTSRCSKFRFKPLANDIQQERLLKICEKENLQYSKEGIEALVR
VSEGDLRKAITYLQSAARLNTEREITEQIIIEIAGVVPAKVIEDVLQICYRGHFEKLEIA
VKDLIDQGYAATNILNQLHDVVIEEKLNDKQKSVITEKMAEVDKCLSDGADEYLQLLSLC
SVVMQQAIHNT
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaaaagtgttttaagtgtgatggagatatgcaggcgtttctgaaaggatct
tcatcacagagtgttaaagctccaaaaccttcatcatcctcctcctcatcagctggagag
aagaaacagagagcagttccctgggtggagaaatatagaccaaagtgtgtggatgaagta
gcttttcaagaggaggtggtggcagtcctgaagaaatctctagagggtgctgatctcccc
aacctgctgttttatggacctcctggaacaggaaagacctccaccatcctcgctgctgca
agagaactcttcggacccgagctgtaccgacagagagttctggagctcaatgcttctgat
gaacgaggcattcaggtgatccgtgagaaggtgaagaactttgcccagttgacggtggcg
ggttcgaggacagacggaaagccgtgtcctccgtttaagataatcatcctggatgaggca
gattctatgaccaaccccgctcaggcggctctcagacgcaccatggagaaagagtctcgg
acaacacgcttctgtctcatctgtaactacatcagcagaatcattgagccgttgacttca
agatgctccaagttccgctttaaacctctggccaatgacattcaacaggaacgtctgcta
aaaatctgtgagaaagaaaatctgcagtacagtaaagagggcatcgaggctctggtccgg
gtgtcagagggcgatctcaggaaagccatcacatatctccagagtgccgcgagactcaac
actgagcgggaaattactgaacaaatcatcattgagatcgctggggtggttccagctaaa
gtgattgaagacgtgctgcagatctgttacaggggtcattttgaaaagctggagattgct
gtgaaggatctgattgatcagggatatgctgcaacaaatattctcaaccagttacatgac
gtcgtcattgaagagaagctgaacgataagcagaaatctgttatcacagagaaaatggct
gaggtggataagtgtctgagtgacggggcagatgaatatctacagttattgagtctctgc
tctgttgttatgcagcaggccatacacaacacctga
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