Triplophysa rosa: 130571485
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Entry
130571485 CDS
T09216
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tros03009
]
130571485 (wdr18)
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
130571485 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_alt
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
PROPPIN
Ge1_WD40
WDR54
Beta-prop_IP5PC_F
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
130571485
NCBI-ProteinID:
XP_057218471
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Position
LG20:complement(7627410..7690080)
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AA seq
428 aa
AA seq
DB search
MSAPMEVVLSADSAGQLWNCAVFDPHAGTNLLSYRGGNTSARSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKVVCPGIVTCLCASPNGLYVLAGIAEAIYLWEVSTGNLLAILSRH
YQDLSCMCFTDDSSHFVTGGKDNLALVWNLSSVVQLDSPHTPEPRHILSLHSLPITDIHC
GLMGPQARVATASLDQTVKVWEISSGQMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIF
QVSLCTTSLSRDKTFQKDNDGNQVFKGHRNLVTCLSVSMDGTLLLSGSNDETVRMWDVQS
KQCIRSITHKGPVTNAAIIPAPANMFVPDSRPSIPLPRFSRHLNPSEQGDAGGVCVRPGA
NTQDLEGTYLEKADELYSLMCAITDKSVFGDGENTKVRVSELEEEVRTLKKINKDLYEFS
TQLLTKPN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcccatggaggtggttctgtccgcagattctgcgggacagctgtggaactgc
gcagtttttgaccctcatgccgggacaaatctcttgtcctatagagggggtaacacctcc
gcgaggtctttaactgtcctgaatggggaatacattttaggagctcaactcggcaagaac
ttcataaacgtgtgggagatccagagaaaggaccagttacagcagaaggtcgtatgtcct
gggattgttacctgtctgtgtgcatctcctaatggtctctatgtactagcaggcatcgct
gaagctatatatctgtgggaggtgtcaacaggaaatttgttggccattttgagtcgtcac
tatcaggatctgagctgcatgtgtttcacagacgacagcagccatttcgtgacgggaggg
aaagacaatctggctctcgtatggaatctctccagtgtcgttcagttggattcgccacac
acgccggaaccacgtcatatcctgtcgcttcactccctcccgatcacagacatccactgt
ggcctgatgggaccacaagcccgtgttgccacagcatcactagatcaaactgttaaggtt
tgggaaatttcctccgggcagatgctgctgtccgtcctcttcgatgttggtatcatgtct
gtgacctttgacccctgcgagtacttcctgttttgtggtggaagcgacggcaatattttt
caggtgtctctctgcaccacgagcttaagccgggataaaaccttccagaaggacaacgat
ggcaaccaggtgttcaaaggacacagaaatctggtgacatgtctgtctgtatctatggac
ggcacgctcctgctgtccggctccaatgacgagactgtcaggatgtgggatgttcaaagc
aagcagtgcatacgctccatcacccacaaaggtcctgtaaccaacgctgccatcatacca
gcacctgccaacatgtttgtgcctgacagtcgtccatcaatcccactgccgcggttcagt
cgccacctaaacccatcagagcagggagacgccggaggtgtgtgtgtgagaccgggagcc
aacacgcaggatctggagggcacgtacttggaaaaagcagacgagctctactctctgatg
tgcgccatcacggacaagagcgtgtttggtgatggagagaacactaaagtacgagtgtct
gagctggaggaggaggtgagaaccctaaagaagatcaataaagacctgtacgagttctcc
actcagcttctgaccaaacccaactag
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