Triplophysa rosa: 130571490
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Entry
130571490 CDS
T09216
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130571490 (rbm39a)
Spliceosome [BR:
tros03041
]
Common components
Common spliceosomal components
General mRNP proteins
130571490 (rbm39a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RSRP
PRP38_assoc
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
130571490
NCBI-ProteinID:
XP_057218481
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All DBs
Position
LG20:12650646..12656750
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AA seq
523 aa
AA seq
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MADDLDIEAMLEAPYKKDDNKSLSTNGHEERSKKKKKSKSRSRSKSRERKRSKSRDRKKS
HDRRRSRSKERKRSRSKERRRSRSRERGGRYRAPFSGQKFNGGPRGKTGPPPAIKLSRKR
SRSRSPFKKDKSPVRLPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRI
ISDRNSRRSKGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNLQK
GNSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFADAECA
KKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMARLA
EGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHCFQ
LSNMFNPNSENEHGWEIEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSIPAAMAA
VSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgacttggacatcgaagcaatgttagaggctccttataaaaaggatgacaac
aagtccttaagtaccaatggccacgaggagcggagcaagaagaaaaagaagagcaagagt
cgcagcagaagcaagagtcgggagaggaaaagaagcaagagtcgtgaccgtaagaagagc
catgatcgcagacggagccgcagtaaggaacgcaaacgcagccgcagcaaggagaggcgc
cgttccaggagcagggagcgtggtggtcgttacagagctccattttctggccagaaattt
aacggtggtcccagggggaagactggcccaccacctgccatcaaactaagccgtaaaagg
tctagaagccgcagtcctttcaaaaaagacaaaagccctgtgagactgcccattgataac
ctcacgcccgaggagagagatgcgcgcacagtgttctgcatgcagctggcagccagaatc
cgaccacgagacctggaggaattcttttctgctgtgggaaaagtgagagatgtacgaatc
atctctgatagaaactccagaagatccaagggtattgcttacattgagtttgtggattcc
acctcagtacctttggcaattggcctgtctgggcaaagacttcttggagtaccaatcatt
gtccaggcttcacaggctgaaaagaacagagcagctgcattggccaacaacttgcagaaa
ggaaattctggacccatgaggctgtatgtcggctcattgcattttaacattacagaggac
atgcttagaggcatctttgaaccattcggaaggattgatagtattcaactcatgatggac
agtgaaactggaagatccaaaggatatggctttatcacttttgctgatgctgaatgtgct
aagaaagctctggaacagctaaatggctttgagctggctggcaggccgatgaaagtagga
catgtgacagagcgcactgatgcttcaactgccagctccttcttggacaatgatgagctg
gagaggactggaattgatctgggaactacaggaagacttcaactcatggccagactggct
gagggtactggtcttcaaattccacctgctgcacagcaggctcttcagatgagtggctcc
atggtagccatggctgcagctactgctgctatgaaccctgggttgagttttaacattaac
gtgcccacaaaccaagctttgaatctgccatctcaaccaattgctacacactgcttccag
ctctccaacatgttcaatccaaattcagaaaatgaacatggttgggaaattgaaattcag
gatgatgtgattgaagagtgtaacaaacatggtggagtcatacatatatacgtggacaag
aaatctgctgagggtaacgtctatgtgaagtgtcccagcattcctgctgccatggctgca
gttagtgctttgcatggacgctggtttggcggtaaaatgatcacagcagcttatgtccct
cttcctacataccacaatcttttcccagagtcagtgcaagccacacaacttctcatgccc
agtcgccggtga
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