Triplophysa rosa: 130571513
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Entry
130571513 CDS
T09216
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tros
Triplophysa rosa
Pathway
tros03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130571513 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130571513 (taf4a)
03036 Chromosome and associated proteins [BR:
tros03036
]
130571513 (taf4a)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130571513 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
130571513 (taf4a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130571513 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
130571513
NCBI-ProteinID:
XP_057218531
LinkDB
All DBs
Position
LG20:complement(11276525..11290741)
Genome browser
AA seq
813 aa
AA seq
DB search
MVTTLPSHGAKIGTSTVQTLNGGNAMDPHTGSGTPVSGGQSTSSSDDASASVPVVNNGPG
VSKGHANVTVAPSPNTVIQSSYGSPQCAGPSVVRPSMQTAGTGLTINGSNNNAVSVTVAN
VATQPAPGITTTATPLSMNQTPASVSASPNKSESPKTVSPAGMTLGPQIQSPVVATGAVL
QGVARTAAPATVASSPAIRTIAPQVLAPRLHQSSPGQGIQNIQLPPGMVLVRSDSGQLLM
IPQQMLAQMQAQSQATRPAAPTSTTPGPITSAQVPGTPLMARQMTPTAIIRQGSQTASST
ATTTLQRPPVQQASSVGTVLSVQAGTAQRTVTAATGTTVTSTTETMENVKKCRNFLSTLI
KLATSGKQSTETVANVKELVKNLLEGTIEAEEFTSRLYKELNSSPQPYLVPFLKRSLPAL
RQLTPDSTAFIQQSQTLQSPTVVLTSPNTAATTAPRTLIQPGLSNSSHTASLVLQPSQQG
TIVKPPQVTLTTNPMVTLRGQPQSHVVMGQPQVQLKQIQTLALKQGVVSSTKLTHGSVSV
ALVQRNKAKDAAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGAVTRSCKDEAF
LSASMLQHKILQIGKRFGVTELGPEVVNIVSHATQQRLQNLLEKVSLIAQQKNMTYKEDS
RYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQ
QQELAQIRQREANMTALAAIGPRKKRKLDSPSLGTDTEGSGLSGSASGGLNAGASRQYTR
QRITRVNLRDLLFCLENERSTNHSHLLYQALLK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgcccagccacggtgcgaagatcgggacgtccacagtgcaaactttg
aacggaggcaatgcgatggatccgcacactggaagcggcactccagtgtccggtggccag
tcgacatcatcatcagacgacgcttcggcttctgtcccggttgtcaataacggacccggg
gtgtcgaaaggacatgcaaacgtgactgttgccccgagcccaaacacggtgatccagtct
tcttacgggagtccacagtgtgctggaccctcagttgtcaggccatctatgcaaactgct
ggaacaggtttaactattaacggaagtaacaataacgccgtttcggtgactgtagccaat
gtagcgacccagccagcaccgggaataactactaccgccacccctctttcgatgaaccag
acacccgcctctgtgtctgcgagtcccaacaagtccgagtcccctaaaactgtcagcccc
gccggcatgaccctcggaccccagattcagagccccgtggtggccacgggagctgttttg
cagggagttgcgagaacagcagctccggcgactgttgcatccagtcctgccatcaggact
attgcgccacaggtgttagcgccccgactacaccagagcagcccgggccagggcatccag
aacatccagctacctccaggtatggtgttggtgcgtagtgacagcggtcagttgttgatg
attcctcagcagatgttggcacagatgcaggcccagtctcaggccacccgccctgctgcc
cccaccagcaccacccctgggccaatcacctctgcgcaggtacctggaaccccactaatg
gcccgacagatgacccctaccgccatcataaggcagggatcccagacagccagcagcacg
gccaccaccacactccagagaccacctgtgcagcaggcatcctctgttggcacagtgctg
tcagtgcaggcgggaaccgcccagaggactgtgactgctgccacggggaccaccgtcacc
tcgacaacggagacgatggagaatgtaaagaaatgtaggaactttctgtccacgttgata
aagctggccactagcggtaagcagtcaacggagactgtcgccaacgtcaaagagctggtc
aagaacctgctggaagggacgattgaagccgaggagttcaccagcagactctacaaagag
ctcaactcctctccacagccttacctagtgcctttccttaagaggagtcttccagctctg
cgacagctcactcccgactcaacagccttcattcagcagagccaaaccctccagtcaccc
actgtggtgctgaccagccccaacaccgctgctaccacagctccccgcacactaatccag
cctggcctcagcaactccagccacaccgcctctctggtgttgcagccctcgcagcagggg
acaatagtgaagccccctcaggttaccctgacaaccaatcccatggtaacgctcaggggt
caacctcaaagccacgtagtgatgggtcagcctcaggtgcagcttaaacagatccagaca
ttggcactaaagcagggtgtggtgagcagcactaaactgactcatggttccgtatctgta
gctttagtgcagaggaataaagcgaaggatgctgcaggaggaactttcagggatgatgat
gacatcaacgatgtggcctcaatggcaggtgttaatctttctgaagagagcgcccgaatc
ctggccaccaactcagaactggttggcgcagtcacacggtcttgtaaggacgaagctttt
ctctcggccagtatgctacagcacaagatactacagataggcaagaggtttggggtgacg
gagctgggacccgaagtggtgaacatcgtctctcatgcaactcaacagagactgcaaaac
cttctagagaaagtctcattgattgcccaacaaaagaacatgacttacaaggaggacagt
cggtacgagcaggtggaggacgttcgctctcagctgaagttctttgagcagctcgaccag
ttggagaagcagaagaaagaggaacaggagagagaaattttaatgaaggcagctaagtca
cgttcgcgacaagaggaccccgagcagctgcggctgaaacagaaggccaaagagatgcag
cagcaggagttggcgcagattcgacagagggaggctaacatgacggcgctggcggctatt
ggacccagaaagaaaaggaaactggattctccttcgctcgggactgacacagagggatcg
ggtttgtcagggagtgcgtccgggggcttaaatgcaggagcgtcgaggcagtacactcgc
caacgcatcacgcgcgtaaacctcagggatttgctcttctgtctagagaacgagaggagc
accaaccactcacacttgctctaccaagccctcctcaaataa
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