Triplophysa rosa: 130571571
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Entry
130571571 CDS
T09216
Symbol
lima1b
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130571571 (lima1b)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130571571 (lima1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
YhdP
Motif
Other DBs
NCBI-GeneID:
130571571
NCBI-ProteinID:
XP_057218635
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Position
LG20:complement(1672899..1825999)
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AA seq
762 aa
AA seq
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MDTGSFSRRQWASQSLRITAKEISLVGSRGKGNAIAERFSKYQKAAEEISADKKKLSVDS
LPPTLRSGNLSLLKKRWEHQDKSAPQLSVAPVSKAASSKPNGPPEQCKLVQQSSQQPMSC
ERPAKIKVEVETKREQRVEEEAENRAESDPLSPSSVEKPAAPLNNLKVMFQKDESKVQKE
ASKSTEDIDTQTGNKAIENPVIGTPSLKRSASIRDRMTKYQAAVTRQASFTRLCSVNQAE
GSISNTDHKENTPPAADQQRANTFPESTCPKANGIHVHTTSSCTAAPVSENKDLPKATKK
FYVPVKESCVSCQKTVYPLEKIIADQQIYHKTCFCCAFCSTKLRLGTYASLNGKIYCKPH
FSQLFKSKGNYDEGFGHRPHKELWTARTIKEESEKSEKPKCPVADPVLVKAPEQLSPKVN
ESELADQTTVLDTRSQASSSIKNTTTTVIETRRVRVAWPPPAENEEISKFSSPPTQSAKG
PFKLFRPKWPPEEETPSAHQSPKREELKGLRRSSSLKERSRPFCVAPSMKISKHIQNELK
SFEKPRRGSLEELHSLSKKKTEKNNVQTEAELTGEINKINEVKYKENVSTYQIQENSAKP
GKEKVLPSILKKPQQTKKEAQLQQRKNETQPRTKKRDEPQSKNEAQLQAQKETEHKKTKR
EVESQQTKQEAELQAKKSEPQQVKREILKDRMKDKGETVSCFNSQDTLASPHVEDKAPMT
SQDSVSFCDGEEAEESLTVEEMIKRNRYYDDEEDDDEEVALV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggacactgggtcatttagcagaagacaatgggcatcacagtctttacggataacagct
aaagagatatcattggttgggagccgtggtaagggtaatgccattgctgaacggttttca
aaatatcagaaagccgctgaggagataagtgcagacaaaaaaaaattgtctgttgacagt
ttgcctccaaccttgcggtccggaaacctgagcttgctaaagaaacgctgggaacatcag
gacaaatctgctcctcagctaagcgtggcacctgtgagcaaagctgcttcctccaaaccc
aatggtccaccagaacaatgcaaactcgtgcaacaatccagccagcagccgatgtcctgt
gagagacctgcaaaaataaaggtggaggtggagactaaacgggagcagcgggtggaggaa
gaggcagaaaacagagctgaatcagatccactctctccatcttctgtggaaaaaccggct
gcgcctctcaacaacctcaaagtgatgtttcaaaaggacgaaagcaaggtacaaaaagaa
gcaagcaagagcacagaggacatagacacacagactggaaataaagctattgagaatcct
gtcataggtacacccagtctgaagcgcagtgcctctataagagacaggatgacaaagtat
caggccgcagttacaagacaggcgtcttttactagactgtgctctgtaaaccaggccgag
ggcagtatttcaaacacagatcataaagagaatacaccccctgctgctgatcaacagaga
gcgaacacctttccagagtcaacctgtccaaaggccaatggaatacatgttcacacaaca
agttcctgcacagcagctccagtatcagagaacaaagatctgccaaaagcgactaagaag
ttttatgtgcctgtcaaggagagctgtgtgtcatgccaaaagactgtttatccactggag
aaaattattgctgaccagcagatttatcacaagacttgcttctgttgtgccttctgcagt
accaaactcagattggggacctatgcttccttaaatggtaagatctactgtaaacctcac
ttcagccagctttttaagtctaagggcaactatgacgagggctttggccatcggcctcat
aaggaattatggacggctcgaacaatcaaagaggaatcagagaaaagtgaaaagccaaaa
tgtccagtggcagatcctgtgttggtgaaggctccagagcaactgagccctaaagtgaat
gagtcagaactcgctgaccaaaccacagtgctggatacaagaagtcaagcctctagctct
ataaaaaatacaacaaccactgtaatagaaacaagaagagtgagagtggcatggccacca
cctgccgaaaatgaagaaatctctaaattctccagcccacccactcaaagtgcaaagggt
ccattcaagcttttcagaccaaagtggcctccagaggaagaaactccatccgctcatcag
agccctaaaagagaagaactgaaaggtctgcgacgtagttcctcgctcaaagagcgaagc
cgccccttttgtgtggcacctagcatgaaaatctccaaacatatacaaaatgagctaaaa
tcctttgaaaaacctcgacgaggatcgctggaggagcttcactcactgtcaaagaaaaaa
acagagaaaaacaatgtgcaaactgaggcagaattaacaggtgaaataaataaaataaat
gaagtaaaatataaagagaacgtgtccacttatcaaattcaagagaattctgccaaacca
ggcaaagaaaaggtgctcccttctattctaaaaaagccacaacaaacgaaaaaagaggct
cagctacaacaaagaaaaaatgagacacagccacgaacaaaaaagagggatgagccacaa
agcaaaaatgaggctcagctacaagcacaaaaggagactgagcataagaaaacaaagaga
gaggtagagtcacaacaaacaaaacaagaggcggagctgcaagcaaaaaagtctgagcca
caacaagtaaaaagggagattctgaaagatcgcatgaaagataagggtgaaacggtcagt
tgcttcaacagccaggacacattggcctccccacatgtggaagataaagcccccatgaca
tcccaggattctgtaagcttctgtgatggtgaggaggctgaggagtctctgactgtagag
gaaatgatcaagagaaatcgctactatgacgatgaagaagatgatgacgaggaagtggca
ttagtttga
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