Triplophysa rosa: 130571685
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Entry
130571685 CDS
T09216
Symbol
chrna4b
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4b isoform X1
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
tros
Triplophysa rosa
Pathway
tros04080
Neuroactive ligand-receptor interaction
tros04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130571685 (chrna4b)
04082 Neuroactive ligand signaling
130571685 (chrna4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130571685 (chrna4b)
Ion channels [BR:
tros04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130571685 (chrna4b)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
130571685
NCBI-ProteinID:
XP_057218790
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Position
LG20:7920350..7926857
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AA seq
617 aa
AA seq
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MRATWSLFFLSTVCLQMPYVSSSSPAHAHAEERLLQVLFSNYNKLSRPVANISDVVLIHF
GLSIAQLIDVDEKNQMMTTNVWVKQEWNDYKLRWNPEDYENVTSIRIPSEIIWRPDIVLY
NNADGDFAVTHLTKAQVFYNGRIKWKPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDQ
AKIDLVSMASDVDQMDYWESGEWVIINAVGTYNIKKYECCTEIYPDITYSFIIRRLPLFY
TINLIIPCLLISCLTVLVFYLPSECAEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLI
GEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHRMPYWVRQLFLHLVPRYLFMKRPPASGK
RNCGKLIEMMHKASETQSTFLRTTVLDIPPQSPSPHVGVGVASVTQVDQLQRDSSPKPML
FSSSPSSQYSVLQEDSTQTPQTPVLNYTCTYANNVFASSPSSFQETLGILLHTIPRDGAG
CTDCEIQGHGAESVFVDATQSFLGSCQHRLASKGTNMQMVDHDDTEMCTRHDVSSDGAKA
QNPAKLLNNLSQSLIKALEGVQYIADHLRAEDLDFSVKEDWKYVAMVIDRIFLWMFVLVC
ILGTVGLFLPPWLAGMI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgacgtggagtctattctttctttctactgtctgtctgcagatgccgtacgtg
tcttccagcagtccagctcatgcacatgcagaagaaagactcctccaggtcttattcagt
aactataacaagctgtctcgtcctgtagcaaacatctcagatgtggttctgatccacttt
ggcctatccatcgctcagctcattgatgtggacgagaagaatcagatgatgaccacaaac
gtctgggtgaaacaggagtggaacgattacaagctgcgctggaacccagaggactacgag
aatgtcacctccatcaggatcccctctgagatcatctggaggccagacattgtgctctat
aacaatgcggatggagacttcgccgtgacgcacttgactaaagcccaggtgttttacaac
ggcaggatcaaatggaagccgcctgccatttacaagagctcctgcagcatcgatgtcacc
ttcttccccttcgaccagcagaactgcaagatgaaattcggctcttggacgtacgaccag
gcgaagatcgacctggtgagcatggccagcgatgtggaccagatggactactgggagagc
ggagaatgggtcatcataaatgccgtgggcacctacaacattaaaaagtatgaatgctgt
acggaaatctacccggatatcacctactcgttcatcatcagacgtcttcctctgttttac
accatcaatctcatcatcccctgcctgctcatctcatgcctgaccgtgctggtcttctac
ttaccatccgagtgtgcggagaagatcacactgtgtatctccgtcctcctctctcttacc
gtttttctccttcttatcaccgagatcatcccatccacctcgctggtcatcccgctcatc
ggcgagtacctcctgttcaccatgatcttcgtcactctctccatcatcatcaccgtgttt
gtgctcaacgtccatcaccgttccccccgcacgcacagaatgccctactgggtccgccag
cttttccttcacttggttccacgttaccttttcatgaaacgtccacctgcgtcaggtaaa
agaaactgtgggaaactcatcgagatgatgcacaaggcgtcggagacacagtcaacgttt
cttcggaccaccgtgctggatatcccaccgcagagtcccagcccccatgtgggtgtgggc
gtggcgtctgtcacccaggtggatcaacttcaacgtgactcctcccctaaacctatgctt
ttcagcagttctcccagcagccagtattccgtcctgcaagaagacagcacacaaacacct
caaacaccagttctcaattacacgtgtacgtacgcaaacaatgtctttgcctccagtccc
tcatcatttcaagaaaccctcggtatcctgctacacaccataccacgggatggagctggg
tgtacggattgtgaaatccaaggccatggtgctgagagcgtctttgtggatgccacacag
agttttctggggagttgtcaacatcgtcttgcatccaaggggacgaatatgcagatggtt
gaccatgacgatacagagatgtgtactagacatgacgtttcaagtgatggcgctaaagct
caaaatccagcaaagctactcaataatctgtcgcagtctttaataaaagccctggaggga
gttcaatacattgctgatcatctaagagcggaagatttggacttttcagtcaaggaagac
tggaaatacgttgccatggtgattgatagaatattcctctggatgtttgtgctggtgtgc
attctggggaccgtcggactgttcctcccaccttggctggctggaatgatctag
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