Triplophysa rosa: 130571733
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Entry
130571733 CDS
T09216
Symbol
csf1a
Name
(RefSeq) macrophage colony-stimulating factor 1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
tros04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130571733 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130571733 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tros04052
]
130571733 (csf1a)
Cytokines and neuropeptides [BR:
tros04052
]
Cytokines
CSF and other factors
130571733 (csf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Motif
Other DBs
NCBI-GeneID:
130571733
NCBI-ProteinID:
XP_057218874
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All DBs
Position
LG20:12231552..12238842
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AA seq
553 aa
AA seq
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MNTHITAHKAEIRHQWFFLILCFHLVYAGVPGPCKHSVTQGHLLNLRRLIKNQLQNGCLI
TYSFTERQNLSVVCYIKAAFPHILDLLNTQFIYDKDSDNYRYTNSLMNVIYNIYSQGCIP
SINEEIENSPAKFVRIHMTLARAALVKAEEVIRMYMDLMTKSDDPVNWNCEEEYTEDYPE
STTEPLDQSPGVSECPCTCPAAISSPSKMPFSTSQWNVNLKSTPLPQRSSGRTKQLHKTE
VKHRGAKSNPVPTLSSRTPATLKPTVGDLHSFLLGSVPISMDKTSNSVSKMEHTLSLGVS
PSFTKSKELPDFSPGGTDFSLQSTVPGPYRRDTGDSIQNSVERSTAILLAKRSLDSKSQK
GSFYSHNLLQTWVTTTSHPKVDLKTAAIGMAPVAKEKLFQNLQMSKHMVPVTSTVLKTAV
HLSKHLTTTVEQLSHLNSPPENSQTHTQTLAREPRHLIKTPETKYSRSQEDKQEIHTPED
RQDKGTQRNSTMTETSSTILFFASALIITLACGGVLLITVLFYRQQKVSDQICLFVLNKT
TSQVLSIKQQVLE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacataacagcccacaaagccgagataaggcatcagtggttcttccttatc
ctgtgctttcatttggtctatgctggtgtgccaggcccatgtaagcactctgtcacccaa
ggccatctcctgaatttgagacgcctgattaaaaaccagctgcaaaatggttgtttaatc
acatacagtttcactgaacgtcaaaacctgagtgttgtttgttacattaaagcagccttc
cctcacatactggatctactcaacacacagttcatatatgacaaagactctgacaattat
cgttacacgaattcactgatgaacgtcatctacaacatatactcacagggatgcatacct
tcaatcaatgaagagatcgagaacagccctgcaaagtttgtaagaatccacatgaccttg
gccagggcagctttggtaaaagctgaggaggtgattcgcatgtacatggatctgatgact
aagagtgatgatcctgtaaactggaactgtgaggaggagtacacagaagattacccagaa
tccactactgaaccgcttgaccaatccccaggggtctcagaatgtccgtgcacatgccca
gcagcgatcagttcaccatctaagatgcccttttccacaagccaatggaacgttaaccta
aaatctacaccattaccacaaagatcgtccgggagaactaaacagcttcacaagactgaa
gtaaaacacagaggagcaaaatcaaatccagttcctacactttcttcacggacacctgct
acattaaaaccaacagtgggagatttacacagcttcctcttgggcagcgttccgatttca
atggataaaacctcaaattctgtttcaaagatggagcatacattgtcattgggtgtttcc
ccttctttcacaaagtcaaaggaattacctgatttctctcctggaggaactgattttagt
cttcagtcaaccgtgcctggcccctatagaagagacacgggagatagcattcagaacagt
gtggagagaagcactgccattttacttgccaagaggtctttagattccaaaagccaaaaa
ggatcattttattcccataacttgctccagacttgggttaccacaacatctcacccaaaa
gttgatttaaaaactgcagcgataggaatggctcctgttgcaaaagagaaactttttcaa
aatctccaaatgagcaaacacatggtaccagtcacaagcacagttttgaaaacagctgtg
catttatcaaaacatctgaccaccacggttgaacaactgagtcatctaaacagtcctcct
gaaaactcccaaacacacacccaaacattggcgagggagccaagacatttgataaaaact
ccagagacaaaatacagcagatctcaggaggacaagcaggagatccacactccagaagat
cgtcaagataaaggaacacagaggaactccaccatgacagaaaccagcagtacaatcctc
ttttttgcctctgcactcataataacattagcgtgtggtggagttttgcttataactgtg
ctattttacagacagcaaaaagtaagtgaccaaatatgcctctttgtactaaacaaaaca
acgtcccaagtgttgtcaatcaaacagcaagtgctagaatag
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