Triplophysa rosa: 130571775
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Entry
130571775 CDS
T09216
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130571775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130571775
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130571775
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130571775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
U-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
130571775
NCBI-ProteinID:
XP_057218912
LinkDB
All DBs
Position
LG21:17918290..17920818
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AA seq
537 aa
AA seq
DB search
MSQSKPEERLTLELSCPICLQLYRDPVALPCGHNYCLGCIQNAVDAGDPKHPMCCPECRE
EYSSPKTLARNFKLSGIVDGYLAAMSGGRLRADPSIPCDHCLDDPVAAVKFCTCCEMSLC
SGHLECHKDHMLVEVSAEQGGKRCPVHRKTTEYLCMKKRLFLCSDCLMEGTHQNHDVQTF
EVAKEEMKSVLVGMRKTVSDKLQMTEALLRNAIEREGLDKVEDKLVGKANILLENMSTLI
SAYKSRMRTLMEDELHLRDKSWQANLSDLEGCQQLLREAHQSTQEVLSESSEFVFIQHFL
NIEARVRQAANITIPGLPAQERFNGKHLRTTLRTDNFRAEMNLLLDCLHAMMNPLDLTFN
PATAHPGLLLSTDLKTVKQCGGGKSGSAGDHSERFTTAAQVMCSQGFSTGVHMWTVEIGP
GCMWSVGLCYKSILRKGDHSKLGHNSSSWRLQWKSKKLTACYDSVNVPLGDGLIVPPKKV
EVTLDYEGGTVAFHSTGHGGRKQHLHTFSALFKDVVYPAFGIHSTSEESWITLSSAA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaagtaaacctgaggagaggctaactttggagttgagctgtcccatctgcttg
cagctgtaccgtgaccccgtggcccttccttgcggacacaattactgcctgggttgcata
caaaacgcagtcgacgcaggggatcctaagcacccaatgtgttgtccggaatgcagagag
gagtacagcagcccaaagacgctggcaagaaatttcaaactcagtggcatcgtggacgga
tacctggcggccatgtctggcggcagactgagagcagatccttcgataccgtgtgaccat
tgtttggatgatcccgtggctgcggtgaagttctgcacatgttgcgagatgtcactgtgc
tctggccacctcgagtgccacaaggatcacatgttagtggaggtgtctgcggagcagggc
gggaagagatgtccggtgcataggaagaccacagaatacctgtgcatgaaaaagcgactg
ttcctctgctcagactgtttgatggaggggacccaccagaaccatgacgtgcagacgttt
gaggtcgctaaggaggagatgaagagtgtcctggtggggatgaggaagactgtgtctgac
aagcttcagatgaccgaagctttgctcagaaacgccattgaaagagaaggattggacaag
gtagaagacaaactggtgggcaaggcaaacattcttctggaaaacatgagtacacttata
agtgcatacaagagtcgtatgagaactttgatggaagatgagcttcatttgcgcgacaaa
agctggcaggccaatctgagcgatttggagggttgtcaacagctgctgagggaagcccac
cagagcacccaagaggttctctcagagtcctctgaattcgtcttcatccagcacttcctc
aacatcgaggcgagggtgcgccaggctgccaacatcaccatccctggcctacctgctcaa
gagcggttcaatggcaaacacctgcgcaccaccctgcgaacggacaacttccgagcagag
atgaacctcctgctggactgtctccatgccatgatgaaccctctagacctgaccttcaac
cccgccacagcccaccctggccttctgctgtccactgatctcaaaacagtgaagcaatgt
ggcggagggaagagcggcagtgctggagatcacagcgagcgcttcaccacggccgctcag
gtcatgtgttcccagggtttctccactggagtccacatgtggacggtggagataggtcct
ggttgcatgtggtccgtgggactgtgctacaagagcatcttgcgtaaaggtgaccacagc
aagctgggccataacagcagttcctggaggctgcaatggaagagcaagaagctgacggca
tgctacgattcggttaacgtacccttaggtgatgggttgatcgtgcccccgaagaaggtg
gaagtgaccctggattacgaaggaggaactgttgcgttccacagcacaggtcacggagga
cgaaagcagcatctgcatacgttcagtgcgctgttcaaagatgttgtgtatcctgcgttt
ggtatccactctacttcagaggaatcttggataactctttcaagtgcagcttaa
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