Triplophysa rosa: 130571778
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Entry
130571778 CDS
T09216
Symbol
hoxc4a
Name
(RefSeq) homeobox protein Hox-C4a
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130571778 (hoxc4a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130571778 (hoxc4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
130571778
NCBI-ProteinID:
XP_057218916
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Position
LG21:complement(4142027..4156822)
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AA seq
355 aa
AA seq
DB search
MIMSSYLMDSNYIDPKFPPCEEYSQNSYIPEHSPEYYSRARDSGYQNHHQELYPPRASYQ
ERQYNCASIPEPDTQRGHGLPHAGHLLGKGQSASCEPPPLPLSPATPPAASSACNQATPE
HPNSSASAKQPVVYPWMKKIHISTVNPNYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLT
RRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRLPNTKVRSTSSTGISSGSNTSSTAGV
VAAASSTNTMSASEDLSGTERGEDITRKVARNSKRVEECGGKRTPRSVAFTHFATRAVSA
RGYWRRASRDHLVYLCWQTIKDARQLFCKHTTWRSRQACNYTVWRPYVELQTTLT
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagctcgtatttgatggactctaactacatcgatccgaaatttcctccttgc
gaggaatattcgcaaaatagctacattcccgaacatagcccagaatattacagccgtgca
agggacagtggctaccagaatcaccaccaggagttataccctccgcgggcgagctaccag
gagcgacagtataactgtgcaagcatccctgaacctgatactcaaagaggacatggactg
cctcacgcggggcacctgctcgggaaagggcagtctgcctcatgtgagcccccgccgtta
cccttgtctcctgctacccctccggctgcatcctccgcctgcaatcaagccactccggag
catcccaacagctcagcttctgccaaacaaccagtagtgtacccatggatgaagaaaatt
cacatcagcaccgtgaaccctaattacaatggagcggaacccaagcggtctagaactgct
tacactcgccagcaagtcttagaattggagaaggaattccactataatcgctacttaacg
aggcgaagacgtatcgagatcgctcattccttggtcctctcggagaggcaaatcaaaatt
tggtttcagaaccgcaggatgaagtggaaaaaagaccataggctgccaaacaccaaagtc
agatccacgtcttcgacgggaatttcctccgggtccaacacaagctcgacggctggcgtt
gtggcggcagcttcctccaccaacaccatgtcagcctccgaggatctctccggaaccgag
cgtggcgaggatattacaaggaaagtcgcacgaaatagcaaaagagttgaagaatgcgga
ggaaaacgcactcctcgttcggtcgctttcacgcactttgcaactcgagcagtgagtgcg
cgaggctattggaggagggcctcacgtgaccaccttgtttatctttgttggcaaacaatt
aaagacgcgagacagctgttctgcaagcacacaacctggcgaagcagacaagcatgcaac
tacacagtatggaggccgtatgtggaacttcaaacaactctcacatag
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