Triplophysa rosa: 130571898
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Entry
130571898 CDS
T09216
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130571898 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tros03310
]
130571898 (rarga)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130571898 (rarga)
Nuclear receptors [BR:
tros03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
130571898 (rarga)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
130571898
NCBI-ProteinID:
XP_057219182
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Position
LG21:complement(4284611..4325124)
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AA seq
506 aa
AA seq
DB search
MATNRDRQVGHMTGFPPAVYPFAFNTMRSHPPFDLLTNSSLFGRFGADLPKEMAALSVET
QSASSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKDEIVPPESYELSG
ELEELVNKVSKAHQETFPSLGQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDIVFSFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPDRVDRLQEPLLEALKIY
TRRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QAESTEKKPEPEQPAPPPALLSVKKEQEDEDDSWATENGSEPSPEEEDDDDDDGEEERGT
DSDGEAWGSQEPNAEVSKKSHGGRAQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaccgggaccggcaggtgggtcacatgaccggcttcccccctgctgtctac
cccttcgccttcaataccatgcggagtcaccccccttttgacctgctgaccaatagtagc
ctgtttggccgtttcggggcggatcttcccaaagaaatggctgcgctgtcggtggagacc
cagagcgccagttcagaggagatggtgcccagctcaccctctccaccacctccacctcgt
gtctacaaaccctgtttcgtctgccaggacaagtcttctgggtaccactacggtgtcagt
tcttgcgaggggtgcaagggtttcttccgtcgcagcattcagaagaacatggtgtacacc
tgccaccgcgacaagaactgccagatcaacaaggtcacacgcaaccgctgccagtactgc
cgactgcagaagtgcttcgaggttggcatgtccaaggaagctgtgcgcaacgatcgaaat
aagaagaagaaggatgttaaggacgagatcgtccctccagagagctacgagctgagcggg
gaactggaggagttggttaacaaagtgagcaaagcgcatcaggagaccttcccttcactt
ggccagctgggaaaatatactacaaactccagctcagatcacagagtccaactggatctg
ggcctgtgggacaagttcagcgagctctccaccaagtgcatcattaaaatcgtggagttt
gccaagcgccttccgggcttcaccaccctcaccatcgcagatcagatcaccctcctcaaa
tcagcctgcttggatattctgatgctgcgaatctgcacacgatatacaccagagcaggac
acgatgactttttcagatggattgaccctcaaccggactcagatgcacaatgctggcttt
ggcccacttacagacatcgtgttctcttttgccggtcagctcctgccgctagagatggat
gatacagagaccggccttctcagcgccatctgtctcatttgtggagaccgaatggacctt
gaggagcccgatcgtgtagatcgtcttcaggaacccctcctggaggctctaaagatctac
acacggcggcggcgacctaacaaaccccacatgttcccacgcatgttgatgaagatcact
gacctgcgtggcatcagcaccaagggtgcagaaagagctataactctaaagatggagatc
ccaggccccatgcctcctctcatccgagagatgctggaaaacccagaggccttcgaagac
caggccgagagcacagagaagaagcccgagcccgaacagccggcccctcctccagctctg
ctcagtgtgaagaaagagcaagaggatgaagacgatagctgggccacggagaatggcagc
gagccctcacccgaggaggaagatgacgacgatgatgacggagaggaggagagaggtacg
gacagcgacggagaagcctggggcagccaggaacccaacgcggaggtgtccaaaaagagc
cacggaggaagggctcagtga
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