Treponema sp. OMZ 803: ABH09_00770
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Entry
ABH09_00770 CDS
T09263
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
trp
Treponema sp. OMZ 803
Pathway
trp02020
Two-component system
trp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
trp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABH09_00770 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABH09_00770 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trp03021
]
ABH09_00770 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
trp02035
]
ABH09_00770 (whiG)
Transcription machinery [BR:
trp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABH09_00770 (whiG)
Bacterial motility proteins [BR:
trp02035
]
Flagellar system
Flagellar assembly proteins
Stator
ABH09_00770 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
UTC53260
LinkDB
All DBs
Position
178056..178844
Genome browser
AA seq
262 aa
AA seq
DB search
MGNISLDTRPEDELWLEYKHTQDPQLREFFIIKYAPLVKYVAGKVAVGMPNNVEFDDLVG
YGVFGLLDAIDKYDPEKNVKFNTYAVTRIRGAIFDELRSIDWVPRSVRQQSREIEEVIAD
LEARLGHGATDSEIAEALSMSVEEFHQVLLKISGTSIISLTDLRFGADDSEQTPVVDSIE
APASLNPDVIVEREEMKRIIVDAINELPDREKKVLIMYYYEDMTLREIGKVLEVTESRVS
QIHTSANLKLKAKLSNIRKGIR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatatcagtttagacacgagaccggaagatgagctttggcttgagtataaacat
acacaagacccacagcttcgtgagttttttattataaaatacgcacctcttgtaaaatac
gttgccggtaaggttgccgttggtatgccgaataatgttgagtttgatgatttagtcggg
tacggcgtatttggtctgctggatgctatcgataaatatgatcccgaaaagaatgtgaaa
tttaatacttatgcagtgacgcggatccgcggcgctatttttgatgaattacgctcaatt
gattgggttcctcgttcggtacgtcagcaatcccgtgaaattgaggaagtaatagcggat
ttggaagctcggttagggcacggtgcgaccgattcggaaattgccgaagcacttagcatg
agtgtcgaagaattccatcaagttttattaaaaatttcaggtaccagtatcatctccctt
accgatttacggtttggggcggatgattccgaacagacgcctgttgtagacagtattgaa
gcgccggcttcgcttaatcccgatgtcattgtagaacgagaagaaatgaagcgaattatc
gtggatgcaattaacgaacttcccgatagagaaaaaaaagtattaatcatgtattattat
gaggatatgacattacgggagattgggaaagtattagaggtaaccgaatcgagggtgtct
cagattcataccagtgcaaacctaaaacttaaagcaaaattgagcaatattcgtaagggt
atccgttag
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