Treponema sp. OMZ 803: ABH09_01430
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Entry
ABH09_01430 CDS
T09263
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
trp
Treponema sp. OMZ 803
Pathway
trp03410
Base excision repair
trp03430
Mismatch repair
trp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABH09_01430 (recJ)
03430 Mismatch repair
ABH09_01430 (recJ)
03440 Homologous recombination
ABH09_01430 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trp03400
]
ABH09_01430 (recJ)
DNA repair and recombination proteins [BR:
trp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABH09_01430 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABH09_01430 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABH09_01430 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UTC53363
LinkDB
All DBs
Position
complement(312813..314945)
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AA seq
710 aa
AA seq
DB search
MNWEKKDIDPSVVRSMAQQYGCTPLVASILLRRGIAEGSEAFFHLENDLRYVHNPFLFVN
MEDAVDRILDAKEEGERVLIFGDRDVDGITAVTVLYEALTDLGIPTTWRIPTGDEPYGLS
CEAVDAHEADGGTLIITVDCGISNIQEVAYAAEKGIDVIVIDHHTPQDTLPDAAVIINCK
VPDSGYPNGHLSGCATAWKVVTALRFGLLDIYKQQICLLNVRPVNDAFAVEAIHTVNLVE
TARITETIIPGMVPFSDTRLGRFLQGQQIFVWDKELQLKQLEKVFGKAVEFYVSDFRLEC
AKIAPQLAEMSLLRLKNLSRIGKYNDTPMSELDGFFNIFITLVQQAHNMYGEKEKRELQL
VALSLLADLMQLTGENRILVKQGLAAINAAPRAGLSELMIKQGLIGKHIGTNDIAWNITP
VINATGRMGKPETAIRLFLEQNAAVRNELADAVVAMNEERKELGKTGWAIAEPIARESLA
KYREKLTVVVSDKIHRGITGILSNRLADKFNVPSMVICLMEDGTAVGSLRSARGYRVLSL
PEAYPDFFLDYGGHAFAAGFSLMQEKLAPFLKKVQEFTAAIEFDENSENPPLSIDAELPH
DYLTPDLLTVLDTFEPYGEGFPALQFAAKGIKLTAASIMGKTQPQHLRLTFDCGAYKWTA
VYWQAADKLNVEFKIGDSIDAVFTLSRNTFNGNTVPQMVIQDMRKTGTGI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaattgggaaaaaaaagatatagacccgagtgttgtccgctccatggcgcagcaatac
ggctgcactccgcttgttgcatcgattttgctgcggcgcggtattgcagaagggagcgag
gcgttttttcaccttgaaaacgatctgcgctatgtgcataatcccttcctttttgtaaat
atggaggatgccgttgaccggatcctcgatgcgaaggaagaaggagagcgggtgcttatt
ttcggagaccgcgatgtggacgggatcaccgccgttaccgtgctctacgaagcgctgacc
gatttaggtatcccgacgacatggcgtattcccaccggcgacgaaccgtacggactttcc
tgcgaagcggttgatgcgcatgaagccgacggcggtaccctcatcattaccgtagactgc
ggtatttccaatattcaagaagttgcctacgctgcggaaaaagggattgatgttatcgtt
atcgatcatcataccccgcaggatacgcttcccgatgccgcagtcatcattaactgtaag
gtgccggactcagggtatcccaacggccacctttccggatgcgctacggcgtggaaggtt
gttaccgccctgcgcttcggacttctcgatatttataaacagcagatttgcctattgaat
gtccgccccgtcaacgatgcctttgcagtggaagctatccatacggtcaatttagttgaa
acggctcgaatcaccgaaacgattatccccggtatggttccgttttcagatactcggctt
ggcagatttttgcaggggcagcagatttttgtctgggataaagagttgcagctcaagcag
ctggaaaaagtgttcggtaaggcggttgagttttatgtgagtgattttagactcgaatgc
gcaaagattgcgcctcagcttgccgagatgagccttttgcggttaaagaatttatcgcgg
attggcaagtacaacgacacgccgatgtccgaactcgacggctttttcaatatctttatt
acgcttgttcaacaagcgcataatatgtacggtgaaaaagaaaagcgtgaattacagctt
gtcgcgctttcgctgcttgcagacttgatgcagctgaccggagaaaaccggatattggta
aagcaaggcttagcagccatcaatgccgcgccgcgtgccggtctttccgagttgatgata
aaacaggggcttatcggtaagcacatcggcaccaacgatattgcgtggaatattacgcct
gttatcaacgcaaccggacggatgggtaaaccggaaacggcaatcagacttttccttgag
caaaacgcagcggtacgcaatgaacttgcagatgcggttgttgcaatgaacgaggagcgg
aaagaactcggaaagaccggctgggcaattgccgaaccgattgcgcgagaaagtcttgca
aaataccgcgaaaagctcaccgttgttgtaagcgataaaatccatcgcggcattaccggt
atcctttcaaaccggcttgcagataagtttaacgtgccgagtatggttatctgtcttatg
gaagacggaaccgcagtcggttcgcttcgttccgcccgcggctatcgggtgctctctttg
ccggaagcatatcccgattttttccttgactacggcggacatgcatttgccgcaggattc
agcttaatgcaagaaaaacttgcgccgtttttaaagaaagttcaagaattcaccgctgct
atcgaatttgacgaaaattccgaaaaccctccgctttccatcgatgcggaactcccgcat
gattatttaacgcctgatcttttaaccgtacttgacacctttgagccctacggcgaaggg
ttcccggcgctgcaatttgccgctaaaggaatcaaactaaccgccgcctcaattatgggt
aaaacccagccgcagcatttacgccttacgttcgactgcggagcatataaatggacagcg
gtgtattggcaggcagcggataaattgaacgtcgaatttaaaatcggcgacagtatcgat
gccgtcttcacgttgagccggaatacctttaacggcaatacggtgcctcaaatggttatt
caggatatgcggaagacgggcacgggtatttaa
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