Treponema sp. OMZ 803: ABH09_02925
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Entry
ABH09_02925 CDS
T09263
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
trp
Treponema sp. OMZ 803
Pathway
trp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABH09_02925 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trp03019
]
ABH09_02925 (rny)
Messenger RNA biogenesis [BR:
trp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABH09_02925 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
SPAN
KH_2
UPF0767
Motif
Other DBs
NCBI-ProteinID:
UTC53631
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All DBs
Position
632766..634307
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AA seq
513 aa
AA seq
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MSGIMMVIVCIALVIIGLILGWTIRWLYARFQLSASEQRAERVLQEAIKEAEAQKKDILL
EAKEQLIRERNQQERENRERRSDLQRMERRLTQKEEQLDKRLELAEKNEKQLVEREDALD
EREKVLDGEEERYKEELERISGLTQAQAKDLIIQSLANEAKKDAQVLINRIEEEANLTAE
KKARDILVTTIQRLTTETTSDITVSTVSLPSDEMKGRIIGREGRNIRALETLTGVDIIID
DTPEAVVISCFDPVRKEIARIALERLILDGRIHPARIEEIVQKVTREISQTVYEEGEKVL
FDLGIHDMGQEMVRALGRLHFRTSYGQNVLQHSKEVAILAGTLAAEIGANVEIAKRGGLL
HDIGKGAEADSDKNHAEVGMEMTRKMSLDPRIVNAVGSHHNDIEPSCVESVLVQIADAIS
AARPGARRETMDNYVRRLENLEAIAEGFQGVEKAYAIQAGRELRVLVNNEKIPDQEVKAL
GRDIAKKIENDLKYPGRIRVTLIRETRIIEYAR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatcatgatggtgatcgtgtgtattgctctcgtaattatcggtttaattctt
ggatggacgattcgctggctgtatgccagatttcaactatctgcttctgaacagcgtgca
gagcgggttttacaggaggctataaaagaggctgaagctcaaaagaaggatatccttctt
gaggcaaaagaacaacttattcgggaaagaaatcaacaagaacgagagaaccgcgaacgg
agaagcgaccttcaacggatggaacgccgcttaacccaaaaagaagagcagctggataaa
cggctggaattggcagaaaaaaatgaaaagcaactcgttgagcgggaggatgcgcttgac
gaacgtgaaaaagtcttggatggggaggaagaacggtataaggaagagctggagcggatt
tccggtttaacacaggcgcaggccaaggatttaattatccagagccttgcaaatgaggcg
aagaaggatgcgcaggttcttatcaatagaatagaagaagaagcgaaccttaccgctgaa
aaaaaagcgcgtgatatcttggttacgaccattcagcggctgactacggagacaacaagc
gatataaccgtttctacggtgagcttgccgagtgatgaaatgaaggggcggattatcggg
cgtgaggggcgcaatatacgtgcgctggaaaccttgaccggtgtcgatattattatcgat
gatacgcccgaggcggtggttatttcctgttttgatccggtgcggaaagaaattgcccgt
atcgcattggaacggcttatcctagatggccggattcaccctgcgcgaattgaagaaatc
gtacagaaggttacgcgcgaaatttcgcaaaccgtgtatgaagaaggggaaaaagtactc
tttgacctcggtattcacgatatgggacaggaaatggtgcgtgcgctcggccgcctgcat
tttagaacgagctacggacagaacgtattgcagcattccaaagaggttgctattttggca
ggtacgcttgccgcagaaatcggcgcaaatgtggaaattgcaaaacgcggcggtttactg
catgatatcggtaaaggtgccgaagccgattccgacaagaaccacgccgaagtcggtatg
gagatgacgcggaagatgagcctcgatccgcgtatcgtcaatgcggtcggttcgcaccat
aatgatattgagccgtcctgtgtggaatccgtactggtacagattgccgatgctatttcc
gccgcacggccgggcgcccgccgcgaaacgatggacaattacgtcagacggcttgaaaac
cttgaagcaattgcagaagggttccaaggcgttgagaaagcgtatgcaatccaagcaggc
cgtgagctgcgggtattggtaaacaatgaaaagatacccgatcaagaagtaaaggccttg
ggcagggatattgcgaaaaagattgaaaacgatttgaagtatcctggccgtattcgggta
acgctcatccgcgaaacacgtattatcgaatacgcacgatag
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