Treponema sp. OMZ 803: ABH09_04325
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Entry
ABH09_04325 CDS
T09263
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
trp
Treponema sp. OMZ 803
Brite
KEGG Orthology (KO) [BR:
trp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trp03032
]
ABH09_04325 (gyrB)
03400 DNA repair and recombination proteins [BR:
trp03400
]
ABH09_04325 (gyrB)
Enzymes [BR:
trp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABH09_04325 (gyrB)
DNA replication proteins [BR:
trp03032
]
Prokaryotic type
DNA Topoisomerases
ABH09_04325 (gyrB)
DNA repair and recombination proteins [BR:
trp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABH09_04325 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UTC53880
LinkDB
All DBs
Position
complement(933099..935015)
Genome browser
AA seq
638 aa
AA seq
DB search
MTTPSYSAENITVLKGLDAVRKRPGMYIGSTGPDGLHHLVYEVVDNCIDEAMAGYCDTIL
VVLEKNDTVRVEDNGRGIPVDIHPEEGVSALELVLTRLHAGGKFDKGSYKVSGGLHGVGV
SVVNALSTNMEAIVCRDGFEYVQKFALGEPLCPVTKRGETKKRGTTIRWTADPTIFTETT
TYNFDVLAVRLRELAFLNNTISITLRDERLSTPKEVTFAFDGGISHFVRYLNESKQVLPK
EPIYFDGEKSDVVVELAMQYNDGYKENVLSFVNDINTREGGTHLEGFKTALTRVMNEFLK
KNAKLSKKMEKEEKLMGEDVRAGLTAVLSVKVPEPQFEGQTKTKLGNSDVRSIVDTFINE
KLTLFFEQNPTEIDKILEKAVGEATARIAARKAKEATRRKSGLDSFGLPGKLADCSSKDP
EKCEVYIVEGDSAGGSAKKGRDSKTQAILPLWGKMLNVEKTRLDKVLNNEKLQPIIATLG
TGIGEDFNLDKIRYHKIIIMADADVDGSHIRTLLLTFFFRYMPELIEHGYVYLAMPPLYK
ISYNKKEWYVYDDSERDSILNEIGRNVNPAVQRYKGLGEMDGTQLWETTMDPARRKMMRV
TLPDAVEADRIFSTLMGEEVEPRRKFIEENAVYANLDV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgccttcatattcagcggaaaatattacggttttaaaggggctggacgccgtc
cgcaaacgccccggaatgtatatcggctctaccggtcctgacgggctgcatcatttggtg
tacgaagtcgtcgacaactgtatcgacgaagcgatggcgggctattgcgataccattttg
gtcgtattggaaaaaaacgataccgtcagagtagaagataacggacgcggtattcccgtc
gatattcacccagaagagggcgtaagtgcgctggagttggttttgacgcggctccatgca
ggcggcaaattcgacaagggttcgtacaaggtttccggcggtttgcatggtgtcggtgtt
tctgttgtaaacgcgctttccaccaatatggaagcgattgtttgcagggatggctttgaa
tatgtgcaaaaatttgcactcggcgaaccgctctgcccggttaccaaacggggagagacg
aaaaagcgcggcactaccatccgctggactgccgacccgactatttttaccgaaacgacc
acctataactttgatgtactggcggttcgtctccgcgaactcgcctttttgaataatacc
atcagcatcacactacgcgacgagcggctttccacaccgaaagaagtaacctttgccttt
gacggcggtatttctcactttgtgcgctacctgaacgaaagtaaacaggtgcttcccaaa
gaaccgatttatttcgacggtgaaaaaagcgatgtcgttgtcgagctggcaatgcagtac
aacgacggctataaagaaaatgttctttcgtttgtcaacgatattaacacgcgcgagggc
ggtacccacctcgaaggttttaaaacggcgctcacccgcgtgatgaacgaattcttgaag
aaaaatgccaagctttctaaaaagatggaaaaagaagaaaagttgatgggcgaagacgta
cgtgccggtttaacggcggtactatcggtcaaagttcccgagcctcagtttgaagggcag
acgaagaccaagctcggcaacagcgatgtgcggagtatcgttgacaccttcattaacgaa
aaactcactctcttttttgaacaaaatccgaccgaaatcgataaaatcctcgaaaaagca
gtcggtgaagcaaccgcccgtatcgcagctcgcaaggcaaaagaagcgacccgccggaaa
agcggccttgacagcttcgggctgccggggaaacttgccgactgctcttccaaagacccg
gaaaaatgcgaggtctacattgtggaaggtgattctgcaggcggttctgcaaagaagggg
cgcgacagcaagacgcaggcaattttgccgctgtggggaaaaatgctgaacgtcgaaaaa
actcggctcgacaaggtactcaataacgagaaactccagccgattatcgcaacgctcggt
accggcatcggtgaggattttaaccttgataaaatccgctaccacaagattatcattatg
gcggatgccgacgtggacggttcccatatccgcacgcttttactcaccttctttttccgc
tatatgccggaactgattgagcacggctatgtgtatctcgcgatgccgccgctctataaa
atttcctacaataagaaagaatggtacgtgtatgacgacagtgagcgggacagcattttg
aatgaaattgggcggaatgtgaaccccgcggtgcagcgatacaagggtttgggtgaaatg
gacggcacgcagctctgggagacaacgatggatcccgcccgccgcaagatgatgcgggta
accctgcccgatgcggtagaagctgaccggattttcagcacactgatgggcgaagaagta
gagccgcgccgcaaatttatcgaagaaaatgcggtgtacgcgaatctcgatgtgtaa
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