Thermotoga sp. RQ2: TRQ2_0266
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Entry
TRQ2_0266 CDS
T00706
Name
(GenBank) hydrolase of the metallo-beta-lactamase superfamily-like protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
trq
Thermotoga sp. RQ2
Pathway
trq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRQ2_0266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trq03019
]
TRQ2_0266
Messenger RNA biogenesis [BR:
trq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TRQ2_0266
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GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ACB08625
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Position
253479..255047
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AA seq
522 aa
AA seq
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MRIEILDGHRNIGGNKIRVVDSENDGFLLDFGLNFSRWGEFFEEFLNPRTGKILHDLLKL
EMVPRLNIYRDDLFDGKFEDPVNHAFLFLSHAHADHTGMVGLIDEKIPLLMTGETFAVMR
ASVYTSNSNVLTQLGGKKRRKASDKDLENGIREDLTVSPGNSKSAERLTRRVSFPKEVEL
NDDSTVVDMNSLWKNELFVEPVYHSVIGAAGFAARVDDLWLAYTGDFRTGPETAEEERYW
LDTLGEKRLALSLRTSRFFENLKDKRPLVLIVEGTRVTREENVENTEKDVFENAMRVFRG
TKNLILVDFPIRHLERLFTFLKVCMENDRRLVLMPKDYAYLLEMERVEPLWKLTDEERSF
VRVYHPGKVTYINLEKDALLRAREEGILLSPEEINLHPEKHTMVAGYWDFPHILDLDERV
LNGAVYIHSTSEAYTEEQEIDARRFMNWLRYFNIVPFGIREVNGNIVFTKEFHASGHVSP
QGLEKILNELNPDYIVPVHTLNPGWFVERWDERVLLENVIVL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatagagatactcgacgggcacagaaacatagggggaaacaaaatcagagtggtt
gattctgaaaacgacggttttctgctggacttcgggttgaacttttccagatggggagag
ttcttcgaggagtttttgaaccccagaacaggtaagatccttcatgacctgctgaagctc
gaaatggttccccggctcaacatttacagggacgacctcttcgatggaaagttcgaagat
cctgtgaaccacgcctttctttttttgagccatgcgcacgcggatcacaccggaatggtg
ggcctcatagacgaaaagatccccctcctcatgaccggcgaaaccttcgctgtgatgaga
gccagtgtgtacacgagcaactcaaacgttctgactcagctcggtggaaagaaaagaaga
aaggcctcagataaagatctggaaaacggaatccgcgaagacctcacggtgagcccggga
aattcgaagagcgcggaaagattgacaagacgcgtttcttttcctaaagaggtcgaactc
aacgacgattcaactgttgtcgatatgaactccctgtggaagaacgagctgttcgttgaa
cctgtgtaccactccgtcataggagccgcgggctttgcggcaagggtggacgatctctgg
ctcgcttacaccggagacttcagaacgggtcccgagacagcagaagaagagcgctactgg
ctggacactctcggtgaaaagagactcgcgctttctctcaggacctcgagattttttgag
aatctgaaagacaagcgcccgctcgttctcatcgttgagggaaccagagtcacgagggaa
gagaacgtggagaacacggaaaaggacgtcttcgaaaacgcgatgagagttttcaggggg
acgaagaatctgatactcgtagattttcccatcagacacctggagaggctcttcaccttc
cttaaggtctgcatggaaaacgacagaagactcgttctcatgccaaaagactacgcctat
cttctcgagatggaacgagtggaaccactctggaagctgacggatgaggaaaggtccttc
gttcgtgtgtaccaccccgggaaggtcacctacataaacctcgaaaaagacgcactgctt
cgagccagagaggaagggatccttctctcaccagaggagataaacctgcatccagaaaaa
cacaccatggttgcgggatactgggacttcccgcacatcctcgatctcgacgaaagagtt
ctgaacggcgccgtctatatccactcaacgagcgaagcctacacggaagagcaggagatc
gacgcaaggcgcttcatgaactggctcaggtacttcaacatagttcctttcggtataaga
gaagtgaacggaaacatcgtcttcacaaaagagttccacgcctcgggccacgtttctcct
cagggtctggaaaagattttgaacgaactgaacccggattacatagtgcccgttcacacc
ctgaatccgggctggttcgtcgagcgctgggatgaaagggtcttacttgagaatgtgatt
gtgttataa
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