Thermotoga sp. RQ2: TRQ2_0430
Help
Entry
TRQ2_0430 CDS
T00706
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
trq
Thermotoga sp. RQ2
Pathway
trq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRQ2_0430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trq03019
]
TRQ2_0430
03110 Chaperones and folding catalysts [BR:
trq03110
]
TRQ2_0430
03029 Mitochondrial biogenesis [BR:
trq03029
]
TRQ2_0430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trq04147
]
TRQ2_0430
Enzymes [BR:
trq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TRQ2_0430
Messenger RNA biogenesis [BR:
trq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TRQ2_0430
Chaperones and folding catalysts [BR:
trq03110
]
Heat shock proteins
HSP60 / Chaperonin
TRQ2_0430
Mitochondrial biogenesis [BR:
trq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TRQ2_0430
Exosome [BR:
trq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TRQ2_0430
Exosomal proteins of other body fluids (saliva and urine)
TRQ2_0430
Exosomal proteins of breast cancer cells
TRQ2_0430
Exosomal proteins of colorectal cancer cells
TRQ2_0430
Exosomal proteins of bladder cancer cells
TRQ2_0430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CitX
DUF7342
REF
NNH2
Motif
Other DBs
NCBI-ProteinID:
ACB08786
UniProt:
B1L8Y8
LinkDB
All DBs
Position
complement(419403..421019)
Genome browser
AA seq
538 aa
AA seq
DB search
MPKILKFNEEARRALERGVDKVANAVKVTLGPKGRNVVIEKSWGSPTITNDGVSIAKEIE
LEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKNVAAGANPILLKRGID
KAVEKAVEEIKKVSKKLSGREDIAHVAAISANSAEIGELIAEAMDKVGEDGVITVEDSKT
LETYVEFTEGMQFDRGYISPYFVTDAEKMEVVLKEPFILITDRKLSAVKPLIPILEKVAQ
TGRPLLVIAEDVEGEVLTTLVLNKLKGTLQSCAVKAPGFGERRKAMLQDIAILTGGQVAS
EELGINLEDLTLEDLGRADLVRVKKDETIIIGGKGDPEAIKKRIAQIKAQIEETTSEYEK
ETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRA
RKAVEKVIEELEGDEKIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDA
LRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPSIPEEF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagattctgaagttcaatgaagaagcgagaagggcactcgaaagaggtgtggac
aaggttgctaacgcggtaaaggtgactctcggaccgaagggaaggaacgttgttatcgaa
aaatcgtggggttctccaacaataaccaacgacggtgtttccatagccaaggagattgag
ctcgaggacaaattcgaaaacctcggggctcagctcgtgaaagaagttgcttccaaaaca
aacgacgttgccggtgatggtacaacaactgctacggttctcgcacaggctatgatcaaa
gaaggtctcaagaacgttgcagcgggcgccaatccaattctcctcaagaggggtatagac
aaagccgttgagaaagccgttgaagagatcaagaaggtctccaagaaactttccggtagg
gaggacattgcccacgttgccgctatatctgcgaacagcgccgaaataggagagctcatc
gcagaagctatggacaaggtaggagaagacggggtcatcactgtggaagattccaaaaca
ctcgaaacctacgttgaattcaccgaaggtatgcagtttgacagaggttacatctcacca
tacttcgtcacggatgccgagaagatggaggtcgttctgaaggaacccttcatactcatc
actgacaggaaactcagcgctgtgaaacctctcattccgatccttgaaaaggtcgctcag
accggaagaccacttctcgttatagcggaagacgttgaaggagaagttctgacaacactt
gttctcaacaaactcaagggtactctccagtcctgtgccgtgaaggctcctggattcggt
gaaagaagaaaagccatgcttcaggacatagcaattctcaccggaggtcaggtggcaagt
gaagagctcggaatcaatctcgaagatctcacccttgaagatctcggaagagccgatctt
gtgagggtcaagaaagatgaaaccatcataattggaggaaaaggtgatccagaggctatc
aagaagagaatcgctcaaatcaaagcccagatagaggaaaccacatctgagtacgaaaaa
gaaactctccaggaaaggatggcaaaactcgcaggaggagtagccgtcataaaggttgga
gcggccaccgaaacagagctcaaggaaaagaaacacagaattgaagacgcactgagcgct
acaagagcagccgttgaagaaggtatcgttcccggtggaggagtaacactcctgagagca
agaaaggccgttgaaaaggtcatagaagagctcgaaggcgacgagaaaataggagctcag
atcgtttacaaggcactctcagcccccattaagcagattgctgaaaacgcaggatacgac
ggagcggtgatcatagagaagatactctcgaatgacgatccagcctatggattcgacgca
ctcaggggagaatactgcaacatgtttgaaagaggaatcattgacccagcaaaggttaca
aggagcgccctgcagaacgccgcgtccatcgctggaatgctcctgacaacggaagtgctc
atcgttgaaaaacccgaggagaaaaaagaaacaccgagtattcctgaagaattctaa
DBGET
integrated database retrieval system
