Thermotoga sp. RQ2: TRQ2_0474
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Entry
TRQ2_0474 CDS
T00706
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
trq
Thermotoga sp. RQ2
Pathway
trq03030
DNA replication
trq03430
Mismatch repair
trq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRQ2_0474
03430 Mismatch repair
TRQ2_0474
03440 Homologous recombination
TRQ2_0474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trq03032
]
TRQ2_0474
03400 DNA repair and recombination proteins [BR:
trq03400
]
TRQ2_0474
Enzymes [BR:
trq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRQ2_0474
DNA replication proteins [BR:
trq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TRQ2_0474
DNA repair and recombination proteins [BR:
trq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TRQ2_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
ACB08830
UniProt:
A0A0F6AK35
LinkDB
All DBs
Position
461808..464336
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AA seq
842 aa
AA seq
DB search
MIPWVISPYSFDGSVVRFEKLALLLKSKGLKSVILADRNFHAAVKFNTIMRKHGLIPVHG
LWKGGRIFVARNREEFDRLVRYYSGETHELEDIPVFHESELTPVRYLDVYEKKASIFMRK
VFGLDEDVQGFPEKCEDVADILNAEAYDLRVNHRFPTPPKGWNESLIKKAEPLGEEYISR
LKRELEVIKRKGFTPYIYTVEKVVEIAKKMGIKVGPGRGSAVGSLVAYLCGITEVDPIKY
DLLFERFLNEERQEPPDIDVDVEDRRRKDLIKELSKSFQVYQVSTFGNLTEKSLKNLINS
VLPDASLEEKNEIYKTVYGLPHHPSVHAAGVVISENPLPLPTRMEEDIPITDYDMYDLQE
IGVVKIDILGLKTLSFIKDFKKEIFDYSDEKTYHLISKGKTLGVFQLEGLQARKLCRRIS
PRNMDELSILLALNRPGPLRSGLDVMFSNPKNVPEFFRKTFPETRGVLIYQEQIMRLAMF
AGLSGTEADILRRAIAKKEREKMEPLLEKMKKGLLEKGMENAEQILEILLNFSSYAFNKS
HSVAYAHITYQTAYLKVHHLEEFFKLYFAYNSSDTEKIFLAVQELRSEGYRVHPPDINTS
GKELVFHGKDVYLPLTVVKGVGATLVEQIEKIRPINSVRELQERVTGVPRNVVENLITAG
AFDKLYENRKLALEELNKKVEKDILEIRSLFGEKVEQESSTVKIGDITELEEKSMGFPLT
PVHEVPTGLFARIADVFTYGRILPVLVKRVSRNIVTDGLSVCRLRTDVPDGVHLVLLSPL
QKIIKIWPFNENTRFVYRVDPTAMLEKAGQNEITEVLKNGAVVRYEGYRPLTDEYRYRIV
PR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgattccatgggtgatatctccctattctttcgatggctcagtcgttcgattcgaaaaa
ctggcccttctcttgaaaagtaagggattgaaatctgtcatcctcgccgacagaaacttc
cacgccgctgtgaagttcaacacgatcatgagaaaacacggcctgataccggttcacggc
ctctggaaaggcggcagaatcttcgtcgcgagaaacagagaggaattcgacagactggtc
aggtactacagtggagaaacgcatgaactcgaagacatacctgttttccacgaaagcgaa
ctcacacctgtaagatatctcgatgtctatgaaaaaaaggcaagcatcttcatgagaaaa
gtcttcggactcgacgaagacgttcagggttttccagaaaaatgtgaagatgtggccgac
attctgaacgcagaagcctacgatctcagagtgaatcacagattccccactcccccaaag
ggttggaacgaatcactcataaaaaaggcagaaccattgggtgaagagtacattagccgt
ctgaaaagagaactcgaggtgataaaaagaaagggtttcaccccgtacatctacacggtg
gaaaaagtggtagagatcgcaaagaaaatgggcataaaagttgggcctggaagaggaagt
gcggttggttccctcgttgcatacctgtgcggaataacagaggtagatccaataaaatac
gaccttctcttcgaacgcttcttgaacgaagaaaggcaggaaccccccgatatagatgtg
gatgtggaagacaggagaagaaaagacctgataaaggaattatcaaagtcttttcaagtc
tatcaggtttcaacctttggaaacctcacagagaaatctctgaaaaacctcataaactcc
gttcttccagatgcgtctcttgaagagaaaaacgaaatctacaaaaccgtttacggactg
ccgcaccaccccagtgttcacgccgcgggagtcgtgatctcagaaaaccccctgccgttg
cctacaagaatggaagaagatatcccaataacggactacgacatgtacgatcttcaagaa
ataggtgttgtgaagatcgatatactgggtcttaaaacactctcgttcataaaggatttc
aaaaaagagattttcgattactctgatgaaaaaacgtatcatctcatctccaagggaaaa
actctcggtgtgtttcagctcgaaggtctccaggcaagaaaactatgcagaagaatctct
cccagaaacatggacgaactctccattctccttgccctcaacagacctggtccattgagg
tctggcctggatgttatgttttcgaatccgaagaacgttcccgagtttttcaggaagacg
tttccagagacaagaggggttctgatctatcaggaacagatcatgcgactcgccatgttc
gcgggtctctcaggcaccgaagcggatattttgagaagggccattgcaaagaaagaaaga
gaaaaaatggaacctctccttgaaaagatgaaaaaaggccttcttgaaaaaggtatggag
aacgcagaacagatcctcgagatcctcctgaacttttcctcctatgccttcaacaagtct
cacagcgtcgcatacgcccacatcacataccagacggcatatttgaaagtccatcatctt
gaagaattcttcaagctctacttcgcgtacaattcttcagacaccgaaaagatcttcctt
gccgttcaggaactgagaagcgaaggatacagagtacatcctccagatatcaacacctct
ggaaaagaactggtctttcacggtaaagacgtttaccttcccctgacggttgtgaaagga
gtgggagcaaccctggttgaacaaatcgaaaaaatcaggccgatcaacagtgtgagagaa
cttcaggaaagggtaaccggagttccgagaaacgttgtggaaaacctgatcacagcaggc
gccttcgacaaactttatgaaaacagaaaactggcactggaagaactgaacaaaaaggtt
gagaaagatattcttgagattcgaagcctcttcggagaaaaggtggagcaggaaagctca
accgtcaaaataggagacatcaccgagctcgaggaaaagagcatgggattcccgttgaca
cccgttcatgaagttcccacaggactctttgcccgtatagccgatgtcttcacgtatggt
aggatccttcctgtgctcgtcaaaagagtttcgagaaacatcgtgacggatggcctttcc
gtttgccgtctgagaacagacgttcccgatggtgttcaccttgtgctcctctctcccctt
cagaagatcatcaaaatctggcccttcaacgaaaacaccaggttcgtgtacagagtggat
cccaccgcgatgctggaaaaggccggtcaaaacgagataacggaagtccttaaaaacggg
gctgttgtaaggtatgaaggctaccgacctctaacggatgaatatcgctacagaatcgtt
ccccgatag
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