Thermotoga sp. RQ2: TRQ2_0511
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Entry
TRQ2_0511 CDS
T00706
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
trq
Thermotoga sp. RQ2
Pathway
trq00040
Pentose and glucuronate interconversions
trq01100
Metabolic pathways
trq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
trq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TRQ2_0511
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TRQ2_0511
Enzymes [BR:
trq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TRQ2_0511
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ACB08867
UniProt:
B1L969
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Position
complement(512179..513276)
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AA seq
365 aa
AA seq
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MRFSRVVSLVLLLVFTAVLTGAVKASLNDKPVGFASVPTADLPEGTVGGLGGEIVFVRTA
EELEKYTTAEGKYVIVVDGTIVFEPKREIKVLSDKTIVGINDAKIVGGGLVIKDAQNVII
RNIHFEGFYMEDDPQGKKYDFDYINAENSHHIWIDHCTFVNGNDGAVDIKKYSNYITVSW
CKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNCIQRMPRIRFGMAHVFNNFYSM
GLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPVEGYLTL
GEGDAKNKFYYCKEPETRPVEEGKPAFDPHEYYDYTLDPVDDVPKIVVDGAGAGKLVFED
LMSSK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaggttttctcgtgtggtttctttagtactgcttcttgttttcacagctgttctaact
ggtgctgtaaaagcttctctcaatgacaaacctgtgggatttgcatccgtaccgacggcg
gatttaccggagggcacagttggtggattgggtggtgagatcgttttcgtcagaacagcg
gaagaactggagaaatacacaacagcagaaggaaagtacgtaatagtcgttgatggaacg
atcgtttttgaaccaaagagagaaattaaagttctttcagacaaaacgatcgtgggaata
aacgatgcaaagatagtcggtggaggtcttgtaataaaggatgcccagaatgtgatcata
agaaatattcattttgagggtttttacatggaggacgatcctcaaggtaagaagtatgat
ttcgactatatcaacgcagaaaattctcatcatatctggatcgaccactgtaccttcgtc
aacggcaacgatggtgcagtggatattaaaaaatactcaaactacatcactgtttcttgg
tgtaaatttgtggatcacgacaaagtctccctcgttggttcctccgacaaagaagatccg
gaacaggcaggtcaggcttacaaggtcacgtaccaccataactacttcaagaactgtatt
cagagaatgcccagaattagatttggaatggcacacgtgttcaataacttctacagcatg
ggcctgagaacaggtgtctctggaaatgtctttcccatttatggcgtggcttcagcgatg
ggagcaaaagttcacgttgagggaaactacttcatgggatacggtgctgtcatggcagaa
gccggcattgcgttccttcccaccagaatcatggggcctgtggaaggttatctgacactg
ggtgagggcgatgcgaagaacaagttctactactgcaaggaacctgaaacccgtcctgtt
gaggaaggaaagcctgcttttgatcctcacgaatactacgactacacactcgatcccgtc
gatgatgttccaaagatagtagtggatggtgcaggagcaggcaaactggtttttgaagat
ctcatgtcttctaaatga
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