Thermotoga sp. RQ2: TRQ2_1581
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Entry
TRQ2_1581 CDS
T00706
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
trq
Thermotoga sp. RQ2
Pathway
trq03420
Nucleotide excision repair
trq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TRQ2_1581
03430 Mismatch repair
TRQ2_1581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trq03400
]
TRQ2_1581
Enzymes [BR:
trq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRQ2_1581
DNA repair and recombination proteins [BR:
trq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TRQ2_1581
MMR (mismatch excision repair)
Other MMR factors
TRQ2_1581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_11
AAA_30
DEAD
ResIII
ADDB_N
mTERF
TcdB_N
HEPN
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACB09917
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All DBs
Position
1590611..1592557
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AA seq
648 aa
AA seq
DB search
MKEYRIRPKEANLSFLEDLDEEQRKAVVESEGRCIVIAGPGSGKTRVITYKIAYLLANGV
DPSRILLVTFTRAAAREMVERAKTVTGRELSEMLAGTFHHVCNYFLRKYAPYVGLERNYS
ILDREDAESLMRHARSKYLERKSKEERKNFPQPSVLMAIYSYMKNTLKSLRESIVVKNPK
FLDLKEEISEIFDLYEQEKRSQNVVDYEDLLFYAYRLLEENKEIRDREAERFLWVLVDEF
QDTNYVQYRIVEHLSSKHGNVLAVGDDAQSIYSFRGARYENVEDFIKVSGTKIFKIQTNY
RSTESIVKFINAMLPKKSVPKELKPVKKDGMKPVVVKTWDRYEEARFVSQRILELIEEGF
KPEEIAVLYRSHSHSLELQMELVRSRIDFRVLSGPRFTESAHVKDVLSFLRIVQNPRDKS
AWLRTAKLFYGIGDRTASKIADLASAYVEEGLDPFQELKKVSFSGEYSRFIDILDQIRKL
DSPGEMIERVLSSFYSEYLEARYPDFREREMDLERLVEIASRYTSLESFLTDLAVTENVE
IEREISQKEGKVTLTTVHQAKGLEWRVVFVISVNPGDFPNYFAISEGNLDEEERIFYVAI
TRAKEQLYISYQVTGTSYPYRGNRFIMRSGENFIDRIPLELVEFWEVK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaataccggataaggcccaaggaagcgaatctttcttttctggaagatctggat
gaggaacagagaaaagcagtcgttgaatcagagggaagatgcattgtaatagcaggcccg
gggtctgggaaaacccgggttatcacgtacaagatcgcctatcttctggcgaacggtgtg
gatccttccaggattcttctggtcacgttcaccagagcagcggcgcgggaaatggtagag
agagcgaagacggtgaccggaagagagctttctgagatgctcgccggaacgttccaccat
gtgtgcaactactttttgagaaagtacgcaccttacgtgggtttggaacgaaattactct
atcctggacagagaagacgcggagagcctcatgaggcatgcaagaagcaagtacctcgaa
agaaagagtaaagaagagagaaaaaacttcccccagccttctgttttgatggctatatat
tcttatatgaaaaatactctcaaatctttgagggaaagtatcgtagtgaagaatccaaag
tttctggacttgaaagaagaaatctcggagatcttcgatctctacgaacaggaaaaacgc
tctcaaaatgtggtggactacgaagaccttctcttctacgcttacagactcttagaagag
aacaaagaaataagagatcgagaggcggaaagattcctttgggtactcgttgatgagttc
caggataccaactacgttcagtacaggatagtggaacacctatcgtcgaaacacggcaac
gtcctggcggttggagacgatgcccagagtatttactcctttcgaggggcaaggtacgaa
aacgttgaagatttcataaaggtatccggaacaaaaatcttcaagatccagacgaactac
agaagcacggaaagtattgtgaaattcataaacgccatgcttccgaaaaaatccgttcca
aaagaactgaagccggtaaagaaggatggtatgaaacctgttgttgtcaagacctgggat
agatacgaagaagcgcggttcgtgtctcagaggattctcgagttaatagaagaagggttc
aaaccagaagaaatcgcagttctctacagatcacattcgcactctctggagcttcagatg
gaactcgttcgaagtagaatagatttccgtgtgttgtctggtcccagattcaccgagagc
gcccacgtgaaggacgttctttcttttctcagaatcgttcaaaatccaagggacaaatcc
gcatggttgaggactgcaaagctcttctacgggatcggtgacagaacggcttcgaagata
gcggatctcgccagcgcttacgtggaagaaggtctggatcccttccaggaactgaagaaa
gtgagtttcagtggtgagtacagcaggtttatcgatattctcgatcagatcagaaagctc
gattctcctggggaaatgatagagcgcgtcctgtcttctttttattccgaatatctggaa
gcgaggtatcctgatttccgtgaaagggagatggatctggaaaggctcgttgaaatagcg
tctcgctacacaagtctcgaatccttcctgacggatcttgctgtgacggaaaacgttgaa
atagaaagagaaatctctcaaaaagagggaaaggtcactctcaccaccgttcatcaggca
aaagggctcgagtggagagtcgtttttgtcatctctgtgaatcccggagactttccgaat
tatttcgcgatatccgaagggaatctcgatgaggaagagaggatcttctacgttgccata
acaagagcaaaggaacagctgtatatttcctaccaggtcaccggaacctcctacccatac
cgcggaaacaggttcatcatgagaagcggagagaatttcattgacagaataccgcttgaa
ctcgtcgagttttgggaagtgaaatga
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