Trichoderma reesei RUT C-30: M419DRAFT_109946 Help Entry M419DRAFT_109946  CDS       T06031                                  Name (GenBank) hypothetical protein   KO K20184   vacuolar protein sorting-associated protein 41 Organism trr  Trichoderma reesei RUT C-30 Pathway trr04138   Autophagy - yeast trr04148   Efferocytosis Brite KEGG Orthology (KO) [BR:trr00001]  09140 Cellular Processes   09141 Transport and catabolism    04138 Autophagy - yeast     M419DRAFT_109946    04148 Efferocytosis     M419DRAFT_109946  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:trr04131]     M419DRAFT_109946 Membrane trafficking [BR:trr04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     M419DRAFT_109946 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_Vps41 Beta-prop_Vps41 Clathrin Vps39_1 TPR_PEP5_VPS11 zf-RING_11 WD40_CDC20-Fz PEP5_VPS11_N zf_RING_Vps8 WD40_like zf-RING_2 Motif Other DBs NCBI-ProteinID:  ETS02446 JGI:  TrireRUTC30_1_109946 UniProt:  A0A024SD66 LinkDB All DBs Position Unknown AA seq 1264 aa AA seqDB search MAERMARERANGDEEEEEEEEEDEEDDDDDDEEEDDEEEEEEEEDEDDDDDDEEEEEEPQ LKSTRLTQHLGAVYRNGDATSACLVAGDKMIIGTHNGNIHVIQLPGFNTLRVYHAHSASV TAISISPFPPPLPDEKAEMLQRTQTGLAGPATRPPEMSPSAASKRMREVPQVPRTPSNDI YIATSSMDGNVCVQSLVDLKDVQLRNFARPVQAVALSPEYKSDRTYLSGGRAGQLILTVG GGPGRSTSTTVGTAAAVASDWLSTIGVKNSGGKDTVLHSGEGIINAIKWSLSGKYVAWLN EHGTKIMRSKLHLDSTELEDAWKRIGHVDRPHTSEWETMAGVWKGRAEWIDEKLVESDES EQGSHDPVASPTIPNTKAVERLLVGWGGTMWIIHVHPGGVGHGRQAGEKTIARAEIAKIL HIDCIISGISLYAQNQLLVLAYCSPEDEDDAADDDRSGPSHARDTSKQQKSKQSTSSAER DQHHGQRQRLNALPPELRLIDLKSQAEVDRHSLAINRVDRLSAADYHMCLLPARNAASVV ASTKSALEALAGIGSDMWNVAINPKALFSSGASILSRESGDDNASVSKAGSIAGTIRSSA MRARVPTVHPTLSKPGVKIFIHSPYDCVLATKRDLSDHLTWLVEREQYQQAWELLDENPD ILADSLDGVVDSGVPSTPSKHPSGADDFFDDESVADTTQRDLYSAVEKEKRRIGELWIRE LIDEGDWEKAGEVCGKVLTTPDRWEKWVWTFAGANKFDEITKHMPTKPMKPPLPTTLYEV LLGHYIQNNKPRFRELIDTWPTDLFDIPAITTTLENQLKYRDVRENSVEDGERGRDWRIV VESLAKLYEAGGRHRDALRCYIRLQDADSAFRLIGDYHLADAVADDIPAFIGLRVSPDQL KHMTEHELVAATSEAITLLVDEAQHGLVRPEVVVEQLQARNLQLYLFFYLRALWRGQGIA EHTGENIERLVQDSQSLVDNFADLAVRLFAMYDRPLLMEFLKTSTSYGFEKAVQECEQYS YYDELVYLYSKTGQMKRALYLIIDRLNDVNKAIDFAKEQDDPDLWEDLLNYSMDKPSFIR ALLEQVGTTINPITLVRRIPEGLEIQGLREGLIHMMKEHELQHSISWGVATVLRSEVATA QSELRTGQRKGIKFEVIEQVDANAAAAEDEKKADGGAPKPGQCAKCLETFTEYEMEALMG FVCGHAFHVSHLLEMLHKGRQVDLDLGHGPEEGGRYSIGMKVMKARLLRDRVRGGCPICH PAEA NT seq 3795 nt NT seq  +upstreamnt  +downstreamnt atggcggagcggatggccagagagcgggccaatggcgatgaggaagaagaagaggaggag gaggaggatgaagaggatgacgatgatgacgatgaagaggaggatgacgaagaggaagag gaagaggaagaggacgaagacgacgacgacgacgatgaggaggaggaggaggagccgcag ctgaagtcaacgaggctgacccaacatctcggcgcagtctatcgcaacggcgatgcgacc agcgcctgtctcgtcgcaggcgacaagatgattatcgggacgcataacggtaacatccat gttatccaattgcccggattcaacactctgcgagtataccatgcacactctgcttccgtc actgccatctcgatatcgccgtttcccccccctctcccggacgaaaaggccgaaatgcta cagcgaacacagactggactggcgggaccggcgacaaggccacctgaaatgtctccgtcg gcagcatcgaaaaggatgagggaggtcccgcaggtaccccgaactccgtcgaacgatatc tacattgccacgtcgtcaatggatggcaacgtttgcgtgcagtcgttggtcgacctgaag gatgtccagcttcgcaactttgcccggccggtgcaggccgtggcattgtcgccagagtac aagtcggatcggacgtatctttctggtggacgagcaggtcaactcatcctcacagtaggc ggtggtccgggtcgaagcacctcgaccacagtcggcactgcggccgccgtggcatctgac tggctttctaccataggcgtcaagaacagcggaggaaaggacacggtgctccattcgggt gagggaatcatcaacgccatcaaatggtccctctcggggaagtacgttgcttggctcaac gagcacggcaccaaaatcatgagatccaagcttcatctcgacagcaccgaactcgaagat gcttggaagagaattggtcatgttgacaggccgcacacgagcgaatgggaaacgatggct ggtgtctggaaaggccgcgctgagtggatcgacgagaagctggtcgaaagtgatgagtcg gagcagggctcccacgatcccgtggcatctccaactatccccaacacaaaggccgttgaa cggctcttggtcggctggggaggaacaatgtggattatccatgtacatccggggggcgtt ggccatggtcgacaagctggtgagaagaccattgcgcgtgctgagattgccaagattctc catatcgactgcatcatttccggaatttctctatatgcccagaaccagctgcttgtgtta gcatactgctctccagaggatgaagacgatgccgcagatgacgacagatctggtccatca catgcgcgggacacatccaagcagcaaaagtctaagcagtccacttcatctgcggagcgt gatcagcaccatggccaacggcaacgcttgaatgccctgccgccagagttgaggctgatt gatctcaagtctcaggcagaggtggaccgacacagccttgccattaatcgcgtcgataga ctatctgcggccgattatcacatgtgtctgttgcctgctcgcaatgccgcctctgtagtg gcttcgacaaagagcgccttggaggcacttgccgggattggttccgacatgtggaatgtt gccatcaatccaaaggccctcttcagctcaggcgccagcatactcagtagggagagcggc gacgacaatgcttccgtctcgaaagccggcagcattgcaggtaccatccgatcgagcgcc atgagagcccgggttcccaccgtgcaccctacactatctaaaccaggggtcaagatattc atccacagtccatacgactgcgtcctggccactaagagagacctttccgaccatcttact tggctcgtggagcgcgagcagtaccagcaggcatgggaacttctcgacgagaatcctgat atccttgccgattcgctcgatggcgttgtagattcgggggtgccttctaccccgtccaag catccctccggagccgacgacttcttcgacgatgaatctgtggcagacacgactcagagg gatctatattctgcagtggaaaaggagaagagacggatcggagagctgtggattcgagaa ttgattgacgagggcgattgggaaaaggctggcgaagtctgcggcaaggttctcacgact cctgatcggtgggagaagtgggtgtggacgtttgcaggcgccaacaagtttgacgaaatc accaagcacatgcccacgaagccgatgaagccgccgttgccgacgaccttgtacgaggtg ctcctaggacattatatccagaacaacaagcctcggttcagagagctgatagacacctgg ccaaccgatctttttgatatccccgccatcacaacgacgcttgagaatcagctcaagtac cgtgatgttcgcgagaacagcgtcgaggacggcgaaaggggtcgagactggcgcatcgtc gtggaaagcctggccaagctgtacgaagctggcgggcggcatcgcgatgcgttgaggtgc tacattaggcttcaagatgcagattcggctttccgcttgatcggcgattaccacctcgcg gacgccgtagcagacgacattcccgcctttatcggactccgagtctcccccgatcaactg aagcacatgaccgagcatgagcttgtggcggccacaagcgaggccatcactctcctggtg gacgaggctcagcacggcctcgtgcggcctgaagttgtcgtggagcagctgcaggcaagg aacctccagctgtacctctttttctatctgcgtgcactctggaggggccaaggaatcgca gagcacactggcgaaaacatcgaacggctggttcaggatagtcaatccctcgtggacaac tttgcggacctggccgttcggttgtttgccatgtatgacaggcctcttctcatggagttt ctgaagacctcaacgtcgtatggattcgaaaaggccgtccaagaatgcgagcaatactca tactacgatgaactggtctacctctactccaaaacgggccagatgaagcgcgcgctctac ctcatcatcgaccgcctcaacgacgtcaacaaggccatcgacttcgccaaggaacaagac gaccccgacctatgggaagacctgctcaactacagcatggacaagcccagcttcatccgc gccctcctcgaacaagtcggcacgaccatcaacccaatcaccctcgtccggcgcatccca gaagggctcgagatccagggcctcagggagggcctcatccacatgatgaaggagcacgag ctccagcacagcatcagctggggcgtcgccaccgtgctgcgcagcgaggtcgccaccgcc cagagcgagctccgcacgggccagcgcaagggcatcaagttcgaggtcatcgagcaggtg gacgccaacgccgccgccgccgaggacgagaagaaggctgacggcggcgcgcccaagccc gggcagtgcgcaaaatgcctcgagacgtttacagagtacgagatggaggccctgatgggg ttcgtgtgcggccatgccttccacgtgagccatttgctcgagatgctgcataaaggcaga caggtcgatctcgacctcggacatgggcctgaggagggagggcgctattcgatcggcatg aaggtcatgaaggcaaggctgctgagggacagggtaagaggaggctgtccaatctgtcat ccggcggaggcgtag

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