Trichoderma reesei RUT C-30: M419DRAFT_111357
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Entry
M419DRAFT_111357 CDS
T06031
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_111357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_111357
03009 Ribosome biogenesis [BR:
trr03009
]
M419DRAFT_111357
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
M419DRAFT_111357
Spliceosome [BR:
trr03041
]
Complex A
U2 snRNP components
U2 related factors
M419DRAFT_111357
Complex B
M419DRAFT_111357
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
M419DRAFT_111357
Ribosome biogenesis [BR:
trr03009
]
Eukaryotic type
90S particles
Helicases
M419DRAFT_111357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
Flavi_DEAD
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ETS01508
JGI:
TrireRUTC30_1_111357
UniProt:
A0A024S8W6
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MADRGAKRASADSDEPSSKKTKMDGKPNPYLAHMYEEENGWGSSASEPSPNSPLAGMKRR
QTTAQQAAKAEDSDSNPFTGRPHSQKYFQILQTRRELPVHKQRQEFLDKYHSTQILVFVG
ETGSGKTTQIPQYVVYDELPHLTGKLIACTQPRRVAAMSVAQRVADEMDVSLGEEVGYSI
RFEDRTSPKTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMALLKQIAE
RRPDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIRTVLQ
IHASEPEGDILLFLTGEDEIEDACRKIGLEAEELIREVDAGPLAIYPLYGTLPPHQQQRI
FDKAPPPLRKGGKPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVS
PISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELKKLGV
EDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSLASEFPLDPALAVMLISSP
EFYCSNEILSITSLLSVPQIFVRPASSRKRADEMKALFSHPDGDHLTLLNAYHAFKGQDT
ADPNSVKQWCHEHFLSYRHLSSADSVRAQLKRIMETHGLELVSTPFEDKNYYTNIRRAML
AGFFMQVAMKESSGKVYRTVKDEQAVLIHPSTVLRTDFDWVMYNEFVLTSKQYIRTCTGI
RPEWLLEIAPVYYDLDTFEDGEIKRSLARAAEKKRRKEAMKKGGR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagaggagcgaagcgagcgagcgcagactcggacgagccgtcgagcaagaag
accaagatggacggaaagcccaatccctacctcgcccacatgtacgaggaggagaacggc
tggggctcgtcggccagcgagccgtcgcccaactcgcccttggccggcatgaagcgtcgc
cagaccactgcccagcaggccgccaaggccgaagactccgattcgaatcccttcacgggc
cgtccgcactcgcagaagtacttccagatcctgcagacgcggcgagaactccccgtccac
aagcaaaggcaagagttcctcgacaagtaccactcgacccagatcctcgtcttcgtcggt
gagaccggttccggaaagacgacccagatcccccagtacgtcgtgtacgacgagctgccg
cacctcacgggcaagctcatcgcctgtacgcagccccgtcgagtcgccgccatgtcggta
gcccagcgtgtggccgacgagatggacgtcagcctcggcgaggaagtcggttacagcatc
cgtttcgaagacaggacgtcgcccaagaccatgctcaagtacatgacggacggtatgctc
ctgcgcgaggccatgcacgaccacgagatgtcgcgatacagctgcatcattctcgacgaa
gcgcacgagagaacgctcgcgacggacattctcatggctctcctgaagcagatcgccgag
aggcgccccgatctcaagatcatcatcatgtctgccacgctcgacgcccaaaagttccaa
aagtacttcaacgacgcgcccctgctggccgtccccggacgaacgcaccccgtcgagatc
ttctacacccccgagcccgagcgggactacgtcgaggccgccatccggacggttctccag
atccacgcctccgaacccgaaggcgacatcctgctcttcctcaccggtgaagacgagatc
gaagacgcctgccgaaagatcggccttgaggccgaggagctgatacgggaggtggatgcc
ggccccttggccatctaccctctgtacggcacgctgccgcctcaccagcagcagcgcatc
tttgacaaggcaccgcctccgctcaggaagggcggaaagcccggccggaaatgcatcgtc
tcgaccaacattgccgaaaccagtttgaccattgacggtatcgtctacgtcgtcgacccc
ggcttcagcaagcaaaagatctacaaccccaggatccgagtcgagtctctgcttgtctcg
cccatctcaaaggcgtcagcgcagcagcgtgccggtcgtgccggtcgtacgaagcctggt
aaatgctttagactctacaccgagaaggcgttcaagaaggagctcatcgagcagacgtac
cccgagattctgcggtccaacctcgccaacacggtgctggagctgaagaagctcggcgtc
gaggacctcgtccactttgatctcatggaccctcctgctccggagaccatgatgcgtgcg
ctggaagagctcaactaccttgcctgccttgacgacgacggcgagctgactacgcttggc
agcctggcatccgagtttcccctggatcccgccctggccgtcatgctcatctcctcgccc
gagttctactgctcgaacgagatcctctccatcacctctctcctgtccgtccctcagatc
ttcgtgcggcccgccagcagccgtaagcgagcggacgagatgaaggccctcttctcccac
cccgacggcgaccacttgaccctcctcaacgcctaccacgccttcaagggccaggacacg
gcggaccccaactccgtgaagcagtggtgccacgagcacttcctgtcctaccgccacctc
tccagcgccgacagcgtccgcgcccagctcaagcgcatcatggagacgcacggtctggaa
ctcgtctcgacccccttcgaggacaagaactactacacaaacatccgcagggccatgttg
gccggcttcttcatgcaggtcgccatgaaggagagctccggcaaagtctaccgcactgtg
aaggacgagcaggccgtcctgatccacccgtcgaccgtgctgcgcaccgacttcgactgg
gtcatgtacaacgagttcgttcttacgtctaagcagtacatccgcacatgcacaggcatc
aggcccgagtggctattggaaatcgctcccgtgtactatgacctcgacaccttcgaggac
ggagagattaagcggtcattggcccgagccgcagagaagaagaggagaaaggaggccatg
aaaaagggtggtcggtga
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