Trichoderma reesei RUT C-30: M419DRAFT_112322
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Entry
M419DRAFT_112322 CDS
T06031
Name
(GenBank) WD40 repeat-like protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
M419DRAFT_112322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trr03009
]
M419DRAFT_112322
Ribosome biogenesis [BR:
trr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
M419DRAFT_112322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-ProteinID:
ETS00596
JGI:
TrireRUTC30_1_112322
UniProt:
A0A024S7X8
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MDIHRCRFVPYKPSAINAVAFSHPKTKSAKQGAVARLAVGRANGDIEIWNPSNGKWHQEL
VIRGGKDRSVDGLVWVNEPNQDLGDGRIVVGKSRLFSIGYTSTVTEWDLEKGKPKRHASG
QHGDIWCLAAQPPALTGASDELHTNKLIAGTIHGELAMYSIEDDDLRFQRVVVRSPTKKA
QMVSITFQSRKIAVVGCSDSTIRIYDVTKGHMLRHMTLGADLAGGSKDIIVWSVKCLPDG
NIVSADSTGQVCIWDGRTYTQSQRLQSHKQDVLSLAISADGSTITSGGMDRRTVLYKQNV
GAGNRWTKVWGRRYHDHDVKTMASFENGRMSVVVTGGPDSNLMLVPLKEMGRENHRTISN
LPQQPPLASARKARFITSWWDREVHIWTLRKPATEIFNTTGEEFDLNQNRKLLKTIVIKG
DSNISSATINPEGTLLVVATTTDVKAFRLEHQDPIKPSDVKLSALEIPEKLKNHGASKVE
LSADGRWLCVVREGSRVVMASLEETNEPDQPPRFASRLQRLPRLRRHIPRYIKNGGLRSY
ERNITHISFTSDSKMVAVADIAGYIDTWVLRGSDENVQDNAEADGENDAASSSDSASDSD
SDSSGDEEDPAGSVSSRWIRNPSANLLPKLPSPPVVLSFSDAVPSKAAGDDGVEAVQDYT
LAAITTSWNVLTFHPLQGSLTPWSRRNPRKALPAPVQDLLDLGKGALWQGSRLWVYGVSF
LLMLDTAQDLPKPASESEAVVSNGAQPGMKRKRTGHTSGAGGKMAENLAPHRVGKYVDGQ
WVNVDVDAASGHEDASDSDDDDNMPDAPEGDLAQLRSTNGTTNGSASGSGNDRKSWWITY
KYRPILGIVALNAADQPLEVALVERPTWDVEMPEKYYAGEEWEKK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggatatccatcgctgccggtttgtgccctacaagccctcggccatcaatgccgtagcc
ttctcccaccccaagaccaagtctgccaagcagggcgctgttgcgcggttggcagtcgga
cgagccaacggtgacattgagatctggaacccttcaaatggcaaatggcaccaggagctg
gtcattcgcggcggcaaggatcgcagcgtcgatggtcttgtttgggtcaacgagcccaac
caggacctgggcgacggcaggatcgtcgtgggcaagtcacgtctctttagtatcggatat
acttctacggtgaccgagtgggatctcgaaaagggcaagcccaagaggcacgcaagcgga
cagcatggcgacatctggtgcctggccgctcagcctcccgcgctgaccggagcctcagac
gaactgcacaccaacaagctgattgctggcaccattcacggcgagctggccatgtactcg
atcgaagacgatgacctgcgcttccaacgagtcgttgtacggtcccctacgaagaaggcg
cagatggtcagcatcacgttccagtcccgcaaaatcgcagtcgtgggctgctcagacagc
accattcgaatctacgacgttacaaagggccacatgctgcgccacatgacgctgggcgcc
gatctggccggaggctcgaaagatatcatcgtgtggtcggtcaagtgcctgcctgacggt
aatattgtctcggccgactctacaggccaagtctgcatctgggatggcaggacctacaca
cagtctcaaaggctgcagagtcacaagcaagatgtcctcagtctcgctatcagtgctgat
ggatcgactatcacgagtggaggcatggatcgccgcaccgttctgtacaagcagaacgtg
ggagcgggtaatcgctggaccaaggtttggggacgaagataccatgaccacgacgtcaag
accatggcatcgtttgagaacggccgcatgagcgttgtagtcactggaggtcctgattca
aacctcatgcttgttcccctcaaggaaatgggacgcgaaaaccaccgaacaatcagcaat
ctcccacagcagccgccccttgcgagcgcacgcaaggcaaggttcataaccagctggtgg
gatagggaggttcatatctggactctgcgaaagccagctacggagatcttcaacacgact
ggagaggagtttgatctgaaccaaaaccgcaaacttctcaagacgattgtcatcaagggc
gactccaatatcagttctgccacaatcaacccggagggcactctcctggttgtcgcgacc
acaacagatgtgaaagccttccggctggagcaccaagacccgatcaagccttcagatgtc
aaactgtctgcgcttgagatcccagagaagctcaagaatcatggtgcttcaaaggtggag
ctttctgcagatggaagatggctctgtgtcgtcagggaaggctctcgcgttgtcatggca
agcctggaggagaccaatgagccggaccaaccaccaagattcgcttctcgtttgcagcgg
cttccccgtctccggcgccatatcccccgatacatcaagaacggaggattgaggagctac
gagagaaacatcacccacatctcattcacttccgactcgaagatggttgcggtcgctgac
attgccggttacatcgacacctgggtcttacgcggctcagacgagaatgtgcaggacaat
gccgaagcagatggagaaaatgacgcggcatcgtcatcggatagtgctagcgacagcgac
agcgactcgtcgggtgacgaggaagacccggccggcagcgtcagtagtcgctggattcgc
aacccgagcgcaaacctgctccccaagctgccctcacctcccgtcgtcttgtcattctcg
gatgctgtaccctcaaaagctgcgggtgacgacggagtggaggccgttcaggactacacc
ctcgccgccattacgacctcgtggaacgtcttgaccttccaccctctgcaaggctcgctc
acgccatggtcacgcagaaaccctcggaaagccctcccggctcccgtccaggaccttctg
gacttgggcaagggcgctctgtggcaggggtcccgcctctgggtttacggcgtatcattt
cttctcatgcttgacactgctcaagaccttcccaagcctgcgtctgagagcgaggctgtc
gtcagcaatggagctcagccgggcatgaagcgcaagagaaccggccatactagtggtgcc
ggaggcaagatggccgagaacttggcaccacaccgtgtcggcaagtatgtggacgggcag
tgggtgaatgtcgatgtggatgccgcctctggccacgaggacgcgagcgacagcgacgac
gacgacaacatgcctgatgctcccgagggcgacctggcccagctccgcagcactaacggg
accaccaacggcagtgccagcggctcaggaaacgaccgcaagagctggtggataacctac
aagtaccgcccgattcttggtatcgtcgccctcaacgccgcggaccagccgcttgaggtt
gcgctagtggagaggccgacgtgggatgtggagatgcctgagaagtattacgccggggag
gaatgggagaagaaataa
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